Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., ATP-dependent DNA helicase RecG from Rhodopseudomonas palustris CGA009

 Score =  239 bits (611), Expect = 4e-67
 Identities = 143/379 (37%), Positives = 215/379 (56%), Gaps = 18/379 (4%)

Query: 603 PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
           P+  T+ Q  A  A+  D+ Q   M RL+ GDVG GKT VA+ AA    + GKQ A++ P
Sbjct: 269 PYALTNSQQQAAAAIAEDLRQPVRMLRLLQGDVGSGKTVVALLAAAAVAEAGKQAALMAP 328

Query: 663 TTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSE 722
           T +LA+QH +          ++V +L+  +  KE+++IL+ +A G++D LVGTH L+  +
Sbjct: 329 TEILARQHIKTIAPLAERAGMQVAILTGREKGKERREILERLAAGEIDFLVGTHALIQDD 388

Query: 723 IRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIA 782
           + +  L L +VDE+HRFGVR++  + +  ADVD+L L+ATPIPRTL +   G  D+S + 
Sbjct: 389 VIYKSLALAVVDEQHRFGVRERLALTSKGADVDVLVLSATPIPRTLVLTYFGDMDVSELR 448

Query: 783 TPPARRLAIKTFVRQSEDSVIRE---AVLREIMRGGQVYFLHNQVETIDKVA-------- 831
             PA R  I T  R   D+ + E    + R I  G +VY++   VE  + V         
Sbjct: 449 EKPAGRQPIDT--RTLSDTRLPEVIDGIGRAIAAGKRVYWICPLVEESENVKLTDAEQRF 506

Query: 832 ADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMD 891
             L +   + ++ + HG+MR  + + VM  F     ++LV TT++E G+DVP A+ ++++
Sbjct: 507 ESLRQRFGDHQVGLVHGRMRGSDKDLVMGQFARGEISVLVATTVVEVGVDVPEASIMVIE 566

Query: 892 RADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLA 951
            A+  GLAQLHQLRGR+GR    +   LL   P      A  RL  I    D   GF +A
Sbjct: 567 NAERFGLAQLHQLRGRIGRGSEASTCLLLYREPLGELSGA--RLRVIRDTTD---GFRIA 621

Query: 952 THDLEIRGAGELLGEEQSG 970
             DL++RG G++LG  QSG
Sbjct: 622 EEDLKLRGEGDVLGTRQSG 640