Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., ATP-dependent DNA helicase RecG from Dechlorosoma suillum PS

 Score =  208 bits (530), Expect = 1e-57
 Identities = 142/378 (37%), Positives = 205/378 (54%), Gaps = 17/378 (4%)

Query: 604 FEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPT 663
           F+ T  Q      +  D+ +A  M RL+ GDVG GKT VA  AA  A + G Q A + PT
Sbjct: 269 FQLTGAQQRVWQEIARDLAEAHPMQRLLQGDVGSGKTIVAALAACQAIECGWQAAFMAPT 328

Query: 664 TLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSEI 723
            +LA+QH++        L I V  LS    + ++K   Q+ A G   ++VGTH L+ +++
Sbjct: 329 EILAEQHYKKLSAWLEPLGITVAWLSGSLKSAKKKAAQQEAAAG-AQLVVGTHALIQADV 387

Query: 724 RFADLGLLIVDEEHRFGVRQK-EKVKAMRADVDI-LTLTATPIPRTLNMAMSGMRDLSII 781
            F  LGL IVDE+HRFGV Q+ E  K  +A +   L ++ATPIPRTL M+     D+S+I
Sbjct: 388 DFLRLGLAIVDEQHRFGVAQRLELRKKGKAGIPHQLMMSATPIPRTLAMSYYADLDVSVI 447

Query: 782 ATPPARRLAIKT-FVRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKV----AADLEK 836
              P  R  I+T  V  +    +  AV   +  G Q Y++   +E  +K+    A D   
Sbjct: 448 DELPPGRTPIRTKLVSDARRDEVVGAVRHAVESGRQAYWVCPLIEESEKLDLQAAIDTHA 507

Query: 837 LVPEA----RITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDR 892
           ++ E      + + HG+++  E    M  F      +LV TT+IE G+DVP A+ ++++ 
Sbjct: 508 ILAEELEGLSVGLVHGRLKPDEKAATMAAFAAGEIQVLVATTVIEVGVDVPNASLMVIEH 567

Query: 893 ADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLAT 952
           A+  GLAQLHQLRGRVGR  H++   LL   P + T  A  RL+ I    D   GF +A 
Sbjct: 568 AERFGLAQLHQLRGRVGRGAHESACVLLYATPLSQTGRA--RLKIIYENTD---GFEIAR 622

Query: 953 HDLEIRGAGELLGEEQSG 970
            DL++RG GE +G  QSG
Sbjct: 623 QDLQLRGPGEFVGARQSG 640