Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., Probable ATP-dependent DNA helicase RecG from Mycobacterium tuberculosis H37Rv

 Score =  212 bits (539), Expect = 1e-58
 Identities = 145/439 (33%), Positives = 228/439 (51%), Gaps = 47/439 (10%)

Query: 603 PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVP 662
           PFE T  Q   ++ +   +   + ++RL+ G+VG GKT VA+ A     D G Q A+L P
Sbjct: 285 PFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAP 344

Query: 663 TTLLAQQHFENFRDRFANLPI-----------RVEVLSRFKSAKEQKQILQDVADGKVDI 711
           T +LA QH  + RD    L +           RV +L+   +A ++KQ+  ++A G+V I
Sbjct: 345 TEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGI 404

Query: 712 LVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRA---DVDILTLTATPIPRTL 768
           ++GTH LL   + F +LG+++VDE+HRFGV Q+++++A         +L +TATPIPRT+
Sbjct: 405 VIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTV 464

Query: 769 NMAMSGMRDLSIIATPPARRLAIKT---FVRQSEDSVIR--EAVLREIMRGGQVYFLHNQ 823
            + + G  + S +   P  R  I T   FV+     + R    ++ E   G Q Y +  +
Sbjct: 465 ALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPR 524

Query: 824 VETID--------KVAADLEKL--------VPEARITVAHGQMRERELEKVMNDFYHQRF 867
           ++  D        + +A  E L        + E R+ + HG++   + +  M  F     
Sbjct: 525 IDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRLALMHGRLSADDKDAAMAAFRAGEV 584

Query: 868 NLLVCTTIIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAI 927
           ++LVCTT+IE G+DVP A  +++  AD  G++QLHQLRGR+GR  H +   L +  P   
Sbjct: 585 DVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWVPP-- 642

Query: 928 TKDAVKRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSGQIQSVGFTLYMEMLEQ- 986
              A +RL A+A   D   GF LA  DL+ R  G++LG  QSG+  ++      E  E  
Sbjct: 643 DTPAGQRLRAVAGTMD---GFALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYI 699

Query: 987 ------AVEALKSGKEPAL 999
                  +EA K+  +PAL
Sbjct: 700 VAARDFCIEAYKNPTDPAL 718