Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., DNA helicase, ATP-dependent, RecG from Marinobacter adhaerens HP15

 Score =  243 bits (620), Expect = 4e-68
 Identities = 151/389 (38%), Positives = 215/389 (55%), Gaps = 18/389 (4%)

Query: 598 FKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQV 657
           F  + PF  T  Q   +  +  D+ Q   M RLV GDVG GKT VA  AA  A   G QV
Sbjct: 261 FLDSLPFALTGAQRHVLADIRQDLSQPLPMLRLVQGDVGSGKTVVAALAALQAIGAGAQV 320

Query: 658 AVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHK 717
           A++ PT +LA+QHF+NFR     L IR+  LS     K + + L+ V  G   +++GTH 
Sbjct: 321 ALMAPTEILAEQHFQNFRAWLEPLGIRLAWLSGKVKGKTRTETLEAVQSGDAAVVIGTHA 380

Query: 718 LLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDI----LTLTATPIPRTLNMAMS 773
           L   ++RF  L L+IVDE+HRFGV Q+  ++       +    L +TATPIPRTL M+  
Sbjct: 381 LFQDDVRFHRLALVIVDEQHRFGVHQRLALREKGVGGSLAPHQLIMTATPIPRTLAMSAY 440

Query: 774 GMRDLSIIATPPARRLAIKTFV-RQSEDSVIREAVLREIMRGGQVYFLHN--------QV 824
              D S+I   P  R  I+T V   S    + E V      G Q Y++          Q 
Sbjct: 441 ADLDTSVIDELPPGRKPIETIVIPDSRREDVIERVRGACREGRQAYWVCTLIEESEALQC 500

Query: 825 ETIDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPT 884
           +  +  A +L + +P+ ++ + HG+++ +E   VM  F     +LLV TT+IE G+DVP 
Sbjct: 501 QAAEVTAQELAERLPDLKVGLVHGRLKAQEKAAVMEQFKVGELDLLVATTVIEVGVDVPN 560

Query: 885 ANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDL 944
           A+ II++  + LGLAQLHQLRGRVGR    ++  L+  PP  ++ +   RL+A+   +D 
Sbjct: 561 ASLIIIENPERLGLAQLHQLRGRVGRGEQASFCVLMYHPP--LSANGKARLQALRDSQD- 617

Query: 945 GAGFTLATHDLEIRGAGELLGEEQSGQIQ 973
             GF +A  DLEIRG GE+LG  Q+G +Q
Sbjct: 618 --GFFIAEKDLEIRGPGEVLGTRQTGMMQ 644