Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., ATP-dependent DNA helicase recG from Caulobacter crescentus NA1000

 Score =  223 bits (568), Expect = 4e-62
 Identities = 156/426 (36%), Positives = 225/426 (52%), Gaps = 22/426 (5%)

Query: 559 RRKAAEKVRDVAAELLDVYAKREIKPGFKFHLDREQYATFKATFPFEETDDQAMAINAVL 618
           RR A +++      L    A R   PG +        A  KA  PF+ T  Q  A++ + 
Sbjct: 221 RRLAYDELLAHQLALAQRKAARRSHPGPRIPAGPLSEAAEKA-LPFKLTRAQIRALSEIR 279

Query: 619 SDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRF 678
            D+   + M RL+ GDVG GKT VAM A   A   G Q A++ PT +LA+QHFE      
Sbjct: 280 GDLASGERMSRLLQGDVGSGKTVVAMLAMADAASAGFQSALMAPTEILARQHFETIAAPL 339

Query: 679 ANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEHR 738
             L + V +L+       +   L  +A+G   I VGTH L   ++ F  L L I+DE+HR
Sbjct: 340 EALDLSVILLTGRDKGAGRAAKLAGLAEGAHHIAVGTHALFQDDVGFRALALTIIDEQHR 399

Query: 739 FGVRQKEKVKAM-RADVD----ILTLTATPIPRTLNMAMSGMRDLS-IIATPPARRLAIK 792
           FGV ++ +++    A+VD    +L ++ATPIPRTL + + G  D+S I   PP R     
Sbjct: 400 FGVNERRRLQEKGPANVDWGVHLLAMSATPIPRTLELTVFGDLDVSRIDEKPPGRTPVAT 459

Query: 793 TFVRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKV--------AADLEKLVPEARIT 844
             V       I E +   I  G Q +++   V   DKV        AADL + +P   + 
Sbjct: 460 RAVPTPRVPEIIERLRVAISGGAQAFWICPLVSESDKVYLRAAEDRAADLARHLP--GVG 517

Query: 845 VAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADSLGLAQLHQL 904
           + HGQM   E + VM  F     N+LV TT++E G++VP A+ ++++ AD  GLAQLHQL
Sbjct: 518 LVHGQMPPAEKDAVMQRFVDGEVNVLVATTVVEVGVNVPNASIMVIEHADRFGLAQLHQL 577

Query: 905 RGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLATHDLEIRGAGELL 964
           RGRVGR   ++   LL  PP  +++ A +RL+ +   +D   GF +A  DLE+RG G+ L
Sbjct: 578 RGRVGRGTRESACVLLYDPP--LSEVAQQRLDILRRSDD---GFEIAEKDLELRGGGDPL 632

Query: 965 GEEQSG 970
           G +QSG
Sbjct: 633 GLKQSG 638