Pairwise Alignments

Query, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., ATP-dependent DNA helicase RecG from Ralstonia sp. UNC404CL21Col

 Score =  220 bits (560), Expect = 4e-61
 Identities = 141/399 (35%), Positives = 206/399 (51%), Gaps = 32/399 (8%)

Query: 596 ATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGK 655
           A F    PF+ T  QA     + +D+     M RL+ GDVG GKT +A  AA  A D G 
Sbjct: 276 ARFMNALPFKLTGAQARVWEEIRADLAHPYPMQRLLQGDVGSGKTVIAALAACQAIDAGW 335

Query: 656 QVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGT 715
           Q A++ PT LLA+QH+         L + +  L+     K++ +    VA G   +++GT
Sbjct: 336 QAALMAPTELLAEQHYRKLSAWLEPLGVDIVWLAGSLKRKQKDEAAARVAAGTAQLVIGT 395

Query: 716 HKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDI----------LTLTATPIP 765
           H L+   + FA LGL +VDE+HRFGV Q+  ++   ++ D           L ++ATPIP
Sbjct: 396 HALIQDAVTFARLGLAVVDEQHRFGVAQRLALRGKASNGDAPAANAQVPHQLMMSATPIP 455

Query: 766 RTLNMAMSGMRDLSII-ATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYF----- 819
           RTL M      D+S I   PP R   +   V  +    + E +      G QVY+     
Sbjct: 456 RTLAMTYYADLDVSAIDELPPGRTPIVTRLVNDARRDEVIERIYAAAREGRQVYWVCPLI 515

Query: 820 -------LHNQVETIDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVC 872
                  L   VET + ++  L+ L    ++ + HG++   E   VM+ F     ++LV 
Sbjct: 516 EESEALQLQTAVETFETLSQSLQGL----KVGLVHGRLPSAEKAAVMSAFAGGDLHVLVA 571

Query: 873 TTIIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAV 932
           TT+IE G+DVP A+ ++++ A+  GLAQLHQLRGRVGR   ++   LL   P  ++  A 
Sbjct: 572 TTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCVLLYQAP--LSPTAK 629

Query: 933 KRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSGQ 971
           +RL+ +    D   GF +A  DLEIRG GE LG  QSG+
Sbjct: 630 QRLQTMRETTD---GFEIARRDLEIRGPGEFLGARQSGE 665