Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (584), Expect = 1e-64
 Identities = 147/382 (38%), Positives = 222/382 (58%), Gaps = 26/382 (6%)

Query: 45  LVTVLSVMNGFEAQLKSRILGVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPP----EP 100
           ++ VLSVMNGF+ ++++R+LG++P A +        +S  P   + A   Q P      P
Sbjct: 1   MIVVLSVMNGFDHEMRTRVLGMVPHATLESGEA---ISDWPS--LAAKVKQNPQVLAVAP 55

Query: 101 LVRSDAVVQSASQLAAGLLIGIEP---QQNDPIEQHLIAGRVTALQAGEYQLFLGHLLAR 157
             +   ++ +  +++  LL GI+P   +Q   I+  +  G++  L  G + + +G   A 
Sbjct: 56  FTQMQGLLTNDGKVSKVLLNGIDPGLERQVSIIDNFMQQGKLDDLAPGSFGIVIGDKAAA 115

Query: 158 SLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKL 216
            L V +GDK+  +  E +  TP G  P  + FTV GIF+ G+ ++DG L VT+L+D A+L
Sbjct: 116 KLGVAIGDKLTFVAPEVT-VTPGGMFPRMKRFTVVGIFHVGAGELDGYLGVTNLQDLARL 174

Query: 217 LRYDAQTISGWRLFFDDPFVVSQLA---EQPLPQDWQWS-DWREQRGELFQAVRMEKNMM 272
            R+    + G RL FDD F   ++A    Q L +D  ++ DW    G L+QA+RMEK M+
Sbjct: 175 HRWKPDQVQGLRLKFDDLFQAPRVAWTIAQQLGEDRYYARDWTRTHGNLYQAIRMEKAMI 234

Query: 273 GLMLGLIVGVAAFNIISALIMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGAL 332
           GL+L LIV VAAFNIIS L+MVV +K+ ++AIL+T G     ++ IFMVQG   GVIG  
Sbjct: 235 GLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPGQIMRIFMVQGTVIGVIGTF 294

Query: 333 VGGLLGVLLAANLNSLMEAL----GVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSL 384
           VG L+G+  A N+++ + AL    G    +        LP  +    +++V   A+VLS 
Sbjct: 295 VGALVGMFAALNVSAAIAALEGLIGHKFLNADVYFIDYLPSQLQVDDVLMVCGAALVLSF 354

Query: 385 LATLFPAYRASSVQPAEALRYE 406
           LATL+PA+RA+  QPAEALRYE
Sbjct: 355 LATLYPAWRAARTQPAEALRYE 376