Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Pseudomonas stutzeri RCH2

 Score =  265 bits (678), Expect = 1e-75
 Identities = 160/416 (38%), Positives = 243/416 (58%), Gaps = 16/416 (3%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           MF P+S FIG RY R +  + F  F+S  S  G+ +GV++++ VLSVMNGF+ ++ +RIL
Sbjct: 2   MFRPLSVFIGSRYTRAKRRNHFISFISLTSLIGLALGVLAMIMVLSVMNGFQREMSARIL 61

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
           G++P A V          A     ++A S      P+ + + ++     +    + GI+P
Sbjct: 62  GMVPHATVIGDQPLDDWQAVAAR-LSAHSQIVGMAPVTQLEGMLSFKGSMQPIQISGIDP 120

Query: 125 QQNDPIE---QHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
           Q    +    + L+ G +  L+ GE+ + +G +  R   + +GDK+ L+V E S  TP G
Sbjct: 121 QAEAQVSILGERLVGGSLDQLKPGEFGVIIGLMTVRRFGLKLGDKLTLIVPEVSS-TPGG 179

Query: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
             P  +   V G+F  G+D+DG L + H  DAA++ R+  + + G RL   D +   ++A
Sbjct: 180 VTPRMQRLNVVGVFKVGADLDGSLGMIHRADAAQIHRWAPEQVQGVRLKLSDLYRAPEVA 239

Query: 242 EQ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEK 298
            Q    L   ++  DW   +G LF A++MEK M+GL+L LIV VAAFNII+ LIMVV +K
Sbjct: 240 AQVGATLGDGYRVEDWSYTQGSLFSAMKMEKTMIGLLLMLIVAVAAFNIIATLIMVVADK 299

Query: 299 QAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEAL----GV 354
           +A++AIL+T G   + ++AIFMVQG+  G  G ++G +LGVL A N++ L+  L    G 
Sbjct: 300 RADIAILRTLGATPRQIMAIFMVQGSIIGFSGTVIGVVLGVLGALNVSELVNWLEKVSGQ 359

Query: 355 ALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
            +FS       +LP  +    +VLV V A+ LS LATL+PA+RA+  QPAEALRYE
Sbjct: 360 HIFSSDVYFISTLPSELRLEDVVLVSVAALSLSFLATLYPAWRAAQTQPAEALRYE 415