Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  270 bits (690), Expect = 6e-77
 Identities = 153/418 (36%), Positives = 243/418 (58%), Gaps = 20/418 (4%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           MF P+  FIG+RY R +    F  F+S  S  G+ +GV++++ VLSVMNGF+ ++ SRIL
Sbjct: 1   MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPE--PLVRSDAVVQSASQLAAGLLIGI 122
           G++P AV+   AG T +    P    AL         P    + ++     +    + G+
Sbjct: 61  GMVPHAVI---AGSTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGV 117

Query: 123 EPQQNDPIE---QHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTP 179
           +P     +    QH+  G +  L+ GE+ + LG + AR   +++GDK+ L+V E S   P
Sbjct: 118 DPALEHEVSIVTQHITRGNLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSS-AP 176

Query: 180 LGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQ 239
            G  P  +  TV GIF  G+++DG + + ++ DAA++ R+    + G RL   D +   Q
Sbjct: 177 GGITPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQ 236

Query: 240 LAEQ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVM 296
           ++      L + ++  DW   +G LF A++MEK M+GL+L +IV VAAFNII+ LIMVV 
Sbjct: 237 VSTAIAAGLGEGYRADDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVN 296

Query: 297 EKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLM----EAL 352
           +K A++AIL+T G   + ++AIF+VQG   G++G L+GG+LG++ A N++SL+       
Sbjct: 297 DKGADIAILRTIGATPRQIMAIFVVQGTVIGIVGTLIGGILGIIAALNVSSLVGWVERVS 356

Query: 353 GVALFSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           G  +FS       +LP  +    ++L+     +LS LAT++PA+RA+ +QPA ALRYE
Sbjct: 357 GQHIFSSDVYFISNLPSELQAGDVLLICSAGFILSFLATIYPAWRAAQIQPAHALRYE 414