Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  196 bits (498), Expect = 1e-54
 Identities = 137/411 (33%), Positives = 216/411 (52%), Gaps = 21/411 (5%)

Query: 13  IGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAVV 72
           +  RYLR R  + F   ++  S  GI +GV +L+ V++VMNGF  +L SRILG+    +V
Sbjct: 2   VAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILGMNGHMIV 61

Query: 73  TEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLI-GIEPQ---QND 128
               G  T  A      +A+       P+V    + Q     + G L+ GI      +  
Sbjct: 62  QPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGLGDASTGALVRGIRADDLTKLK 121

Query: 129 PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRN 188
            I +H+ +G +    +G   + +G  +A  L + VG  + L  +     TP+G  P  + 
Sbjct: 122 SISEHIQSGDLVGFASGS-GVAIGSRMAEQLGIRVGGTITL-TSPNGDVTPMGMNPRVKA 179

Query: 189 FTVAGIFNTG-SDVDGQLMVTHLRDAAKLLRYDAQ-TISGWRLFFDDPFVVSQL---AEQ 243
           +TV+ IF  G S+ D  ++   L +A   L ++A+  +    +F + P  V +L    E 
Sbjct: 180 YTVSAIFEMGMSEYDATIIFMPLEEAQ--LYFNAEGLVQSIEIFAEHPDAVDELRKPVED 237

Query: 244 PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVA 303
              +    +DWRE+    F A+ +E+N+M ++L LIV VAA NIIS LIM+V +K +++A
Sbjct: 238 AAGRQIFITDWRERNRTFFSALEVERNVMFMILTLIVLVAALNIISGLIMLVKDKGSDIA 297

Query: 304 ILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLME----ALGVALFSV 359
           IL+T G  S  V+ IF + GA+ GV G + G  LGV++  N+ S+ +      G  LF  
Sbjct: 298 ILRTMGATSGSVMRIFFMTGAAIGVTGTIAGVALGVVVCLNIESIRQFFSWVSGATLFDP 357

Query: 360 G----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
                  LP  ++  + V V+V+A+ LS LAT+FPA+RAS + P +ALRYE
Sbjct: 358 ELYFLSQLPADMNADETVTVVVMALALSFLATIFPAWRASRLDPVQALRYE 408