Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 89/422 (21%), Positives = 180/422 (42%), Gaps = 48/422 (11%)

Query: 13  IGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAVV 72
           I L ++ GR         + ++  G+ +GV   + + ++M G +     +++  +P   V
Sbjct: 7   IALTHVAGRGRQ------TLVAVIGVAVGVGFSIAMAALMQGGQDDFVRQLVDTMPHVDV 60

Query: 73  TEAAGKTTLSATPPDF-VTALSTQRPPEP------------------------LVRSDAV 107
           T+             F   A+S  RP +                         ++    V
Sbjct: 61  TDEQRSARRQPAEDLFEAVAISGLRPRDDRRGIINPTKAASWLEEWMPGRLAAVLNVQGV 120

Query: 108 VQSASQLAAGLLIGIEPQQNDPIEQHLI----AGRVTALQAGEYQLFLGHLLARSLNVTV 163
           ++ + +    ++IGIEP++   +  H++    +G   AL AG   + +G  +A  L   +
Sbjct: 121 IRYSGREVGAVVIGIEPEKEVKVS-HIVEDFESGSFAALAAGGNNVVIGDTMASRLGAGL 179

Query: 164 GDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQT 223
           GD +  + +E             RNF + G+F+TG+    +     L   A++L      
Sbjct: 180 GDTITAVSSEGLA----------RNFKIVGLFHTGTTARDEGEAYVLLKNAQILSNRPNA 229

Query: 224 ISGWRLFFDDPFVVSQLAEQPLPQ-DWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGV 282
           I+  R+  DDP     +A +   +  ++   W+E    + +A+ +   +M  ++  I+ V
Sbjct: 230 INEIRIKLDDPNAAPTIARRVEAELGYKTVAWQEANESILEALVVRNVIMYTVVAAIMLV 289

Query: 283 AAFNIISALIMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLA 342
           A F I + +  +  EK  ++AI+K+ G     +  +F+++G + G+ G+L+G  LG  + 
Sbjct: 290 AGFGIFNIVSTITHEKARDIAIMKSLGFSQADMRRLFVMEGLAIGIAGSLLGWALGFAIT 349

Query: 343 ANLNSLMEALGVALFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEA 402
             L+ +   +  A       LP+A   L   +    A+  + +A   PA RA+ V P + 
Sbjct: 350 YALSRVRFEI-AATGQEMTRLPIAWSILHYAVATAFALSSAAVAGYLPARRAARVNPVDI 408

Query: 403 LR 404
           +R
Sbjct: 409 IR 410