Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  205 bits (522), Expect = 2e-57
 Identities = 138/411 (33%), Positives = 213/411 (51%), Gaps = 18/411 (4%)

Query: 9   ISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLP 68
           +S ++G R+ R R  + F  F+S+ STAGI +GV  L+ VLS MNGFE +L+ R L V+P
Sbjct: 9   LSLWLGFRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELRERFLDVVP 68

Query: 69  QAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEPQ--- 125
            A +                 + +   R   P +R   + Q         L+GI+     
Sbjct: 69  HAELVGVNEPVHSWQAMVADASKIPGIRGAAPFIRLQGLAQRQGGFQGLSLVGIDTSLEG 128

Query: 126 QNDPIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEAS--QFTPLGRL 183
           Q   IE ++      AL   E  + LG  L   L +  GD + L V + S  Q   LG  
Sbjct: 129 QVSGIESYMPTDAWQALGQDENAIVLGRSLMEKLGLNEGDALVLFVPDLSGRQNGKLGAT 188

Query: 184 PSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAEQ 243
            S + F V G ++ G +++       +   A++L    + +SG R+  DD F   +L  +
Sbjct: 189 RSHK-FVVRGSYHLGGELELVTAYASMAHLARVLEM-GEDVSGVRIAVDDVFKAPKLIRE 246

Query: 244 ---PLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQA 300
                 Q    SDW   +G L+Q +++ + +M L+L L++ VA FNI+S L+M V +K +
Sbjct: 247 LGFTQSQYLYMSDWTRTQGHLYQDIQLVRTLMYLVLALVIAVACFNIVSTLVMAVRDKTS 306

Query: 301 EVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLME----ALGVAL 356
           E+AIL T G++   ++ +FMV GA SG++G L+G   GVL+A NL+ L +    ALGV L
Sbjct: 307 EIAILMTMGLRRSAIVLVFMVHGAISGLLGTLLGVSAGVLVALNLSGLAKAAESALGVQL 366

Query: 357 FSVG----GSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEAL 403
            S        LP  +    + +V  +A+++SLLATL+PAY+AS  +PA AL
Sbjct: 367 LSSDVYFIDFLPSELHGQDVAVVAAMALLMSLLATLYPAYKASLTEPAPAL 417