Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., lipoprotein releasing system transmembrane protein LolE (RefSeq) from Shewanella amazonensis SB2B

 Score =  304 bits (779), Expect = 3e-87
 Identities = 172/412 (41%), Positives = 247/412 (59%), Gaps = 11/412 (2%)

Query: 5   MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
           MF   +  IG RY R R  + F+ F++  + +GI +GV +L+ V SVMNG E QLK+RIL
Sbjct: 1   MFSSSAFLIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKTRIL 60

Query: 65  GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
           G +PQ VV +  G      T       L       P   + A++QS+S + A  L GI P
Sbjct: 61  GAVPQVVVEKNDGFADWRQTADQLQATLPGIVGVSPSTGTQAMLQSSSNIGAVQLSGILP 120

Query: 125 QQNDPIEQH---LIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
           +    +      + +    +L +GEY++ LG  LA  L+V VGD +R++  E   F+PLG
Sbjct: 121 EVESALASRTTTVYSPAFDSLISGEYRIILGVQLASELDVAVGDTIRVLSGEGVVFSPLG 180

Query: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
            +PSQR F V+G+F  GS VD QL   H  DA +L+R     + G RL+ DDPF  ++  
Sbjct: 181 PVPSQRKFIVSGLFQMGSQVDAQLAFIHYDDARRLMRKAPDKVDGLRLYLDDPFE-AEAT 239

Query: 242 EQPLPQ-------DWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMV 294
            + +PQ            DWR+  G LF AV+MEKNM  LML LIV VAAFNI+SAL+M+
Sbjct: 240 GKAVPQILAAEGDTLNVHDWRDGYGHLFGAVKMEKNMTSLMLSLIVAVAAFNIVSALVMM 299

Query: 295 VMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGV 354
           V++K  +VA+L TQG+    V+ IF+ QG+ + ++G ++G + G++L  NLN L+ ALG+
Sbjct: 300 VVDKTTDVAVLMTQGLTRSAVMGIFVTQGSLNALLGLVLGLIAGLVLTLNLNPLLSALGI 359

Query: 355 ALFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           A+   G  LPV I   Q+ L+++  + ++LLATL+PA RAS V+PA ALRYE
Sbjct: 360 AVLGAGQPLPVIIAAEQLWLIVIGTVAITLLATLYPALRASRVEPASALRYE 411