Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., ABC transporter permease from Parabacteroides merdae CL09T00C40

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 85/418 (20%), Positives = 181/418 (43%), Gaps = 32/418 (7%)

Query: 12  FIGLRYLRGRSGDRFSRF-VSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQA 70
           FI  R    + GDR +   V  ++  GI +G+  ++  ++++ GF+ +++++++G     
Sbjct: 6   FIAKRIYFSKEGDRQATPPVVRIAMIGIALGLAVMILSVAIVIGFKKEIRNKVIGFGSHI 65

Query: 71  VVTEAAGKTTLSATPPDFVTALSTQRPPEP-------LVRSDAVVQSASQLAAGLLIGIE 123
            +T      +  +TP      L       P             ++++ S     +L G+ 
Sbjct: 66  QITNFDNNASYESTPIAVSDTLLEHLKTFPGITHVEGFATKPGILKTDSDFQGIVLKGVG 125

Query: 124 PQQNDPI-EQHLIAGRVTALQAGEYQ--LFLGHLLARSLNVTVGDKVRLMVTEASQFTPL 180
              +      +L  G +  L   +    + L   LA  L + VGD       +       
Sbjct: 126 RDYDWTFFRNNLKEGELFILPTDKVSTDVLLSRYLANLLGLKVGDSFLTYFVQDEV---- 181

Query: 181 GRLPSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQ 239
                 R F + GI+ TG  D D   ++  +R   +L  +    +SG  L  DD   + +
Sbjct: 182 ----RARKFRITGIYETGFVDYDKLFVIADIRQIRRLNGWAPDEVSGLELQVDDYDHLDR 237

Query: 240 LAEQPL-----PQDWQWSDW-----REQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIIS 289
           +AE         QD   + +     +E    +F  + ++   + ++L LI+ VA F +IS
Sbjct: 238 VAEDLYFDIAEKQDRNGNTYYTRSIKELNPMIFDWLEVQDINVVVILILILAVAGFTMIS 297

Query: 290 ALIMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSL- 348
            L+++++E+   + ILK  G  +  +  IF+         G + G ++G++L    +   
Sbjct: 298 GLLIIILERTNMIGILKALGENNTSIRKIFLYISFFLIGKGMIWGNVIGIVLCLVQSYFR 357

Query: 349 MEALGVALFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           +  L  +++ +  ++P+ +    IVL+ +  +  ++L  L P+Y  + + PA+++R+E
Sbjct: 358 VVKLDPSVYYL-DAVPIDLTVFSIVLLNIGTLAAAMLMMLGPSYLITKIHPAKSIRFE 414