Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  300 bits (767), Expect = 7e-86
 Identities = 175/416 (42%), Positives = 254/416 (61%), Gaps = 28/416 (6%)

Query: 9   ISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLP 68
           +S  IG RY R R  + F+ F++  + +GI +GV +L+ V SVMNG E QLK RILG +P
Sbjct: 5   LSWTIGYRYWRARKANPFASFITLFAVSGILLGVAALIIVSSVMNGLEGQLKQRILGAVP 64

Query: 69  QAVVT--------EAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLI 120
           Q  V         +    T +       + A+S      P V + A++QS S ++A  + 
Sbjct: 65  QLTVHCEQHLGHWQDVANTLIDGKQ---ILAMS------PSVATQAMLQSPSNISAVQVY 115

Query: 121 GIEPQ-QNDPIEQ--HLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQF 177
           GI P+ + D + +      G + +L+AG+Y++ +G  LAR L+V  GDK+R++  +   +
Sbjct: 116 GIYPELEKDNLSRLNRHFNGSLDSLEAGKYRIIIGAELARRLDVKPGDKIRVLSGDGVVY 175

Query: 178 TPLGRLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVV 237
           +PLG +PSQR F VAG+F  GS VD  L   H  DA +L+R     I   RL+  DPF  
Sbjct: 176 SPLGPVPSQRKFIVAGVFEMGSQVDASLAYVHHEDALRLMRKSPNEIKSLRLYLADPFKA 235

Query: 238 SQLAE------QPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISAL 291
           S+LA       +        SDWRE  G LF AV+MEKNMM LML LI+ VAAFNI+SAL
Sbjct: 236 SKLASKVKAAFEAAGDSVTTSDWRENYGHLFSAVKMEKNMMSLMLSLIIAVAAFNIVSAL 295

Query: 292 IMVVMEKQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGL-LGVLLAANLNSLME 350
           +M+V++K  +VA+LKTQG+ +  ++ IFM+QG+ + V+G LVGGL +GVL   N+N+L  
Sbjct: 296 VMMVVDKTTDVAVLKTQGLTTGSIMGIFMIQGSLNAVLG-LVGGLAIGVLATLNINTLFS 354

Query: 351 ALGVALFSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
            LG+ +   G  LPV ++  Q+ L++V  + ++ LAT++PA RA+SVQPA ALRYE
Sbjct: 355 MLGIHVLGAGQRLPVQLEWGQLSLIVVGTLAITFLATVYPALRAASVQPATALRYE 410