Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 92/404 (22%), Positives = 165/404 (40%), Gaps = 48/404 (11%)

Query: 31  SYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAVVT---EAAGKTTLSATPPD 87
           S+++  GI IGV +++T++++ NG    +  +I  +    ++    +  G    SA  P+
Sbjct: 20  SFLTVLGIVIGVAAVITMVTLGNGATRMVAEQISSLGSNLLILRPGQRLGPGRDSAGAPN 79

Query: 88  F----VTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEPQQNDPIEQHLIAGRVTALQ 143
           F    V AL TQ P    V    VV S   L AG               + +AG    L 
Sbjct: 80  FRAADVEALLTQVPSLKAVAP--VVSSTVTLVAGAE-NWSSSVTGSTNAYFVAGN-WKLA 135

Query: 144 AGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFT--VAGIFNT---- 197
           AG  Q     + A      +G+ V+  +      +PLG     +NF+  + GI  +    
Sbjct: 136 AGR-QFSDEEMRAGKAVCVIGNTVKQKLFAGQ--SPLGNAVRVKNFSCEIVGILASKGQG 192

Query: 198 --GSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDD----PFVVSQLAE--------- 242
             G D D  +++  L  A + L    Q +S   L   D    P V+ Q+ +         
Sbjct: 193 AMGMDQDDVVLMP-LVTAQRRLTGKTQDVSTLMLSLKDGASSPRVMEQIRQLMRERRKLA 251

Query: 243 QPLPQDWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEV 302
           +    ++   D ++    L   +     ++G +  + + V    I++ +++ V E+  E+
Sbjct: 252 ENDDDNFNLMDTKQIAEALSGTIGTMTTLLGAVAAVSLLVGGIGIMNIMLVSVTERTREI 311

Query: 303 AILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGGS 362
            I    G     VL  F+++  +    G LVG +L +L    L++LM             
Sbjct: 312 GIRLAIGALENEVLLQFLIEAVALSAFGGLVGIILALLACLGLSALM------------G 359

Query: 363 LPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           +P   +P   +L    +  + ++    PA RA+ + P EALR+E
Sbjct: 360 MPFLFNPGINLLAFGFSAAIGVIFGYVPARRAAGLDPIEALRHE 403