Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 37/267 (13%)

Query: 145 GEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQRNFTVAGIFN-TGSDVDG 203
           G  ++ LGH  A  L +  G  +RL                +R   V G+ + TGSD DG
Sbjct: 248 GPGEVVLGHAAAMRLGIGPGGTIRL---------------GERELPVTGVLDATGSDDDG 292

Query: 204 QLMVTHLRDAAKLLRYD-------AQTISGWRLFFDDPFVVSQLAEQPLPQDWQWSDWRE 256
                         R+D       A   SG  +  DD  +V+QLA+     D +    R 
Sbjct: 293 VAFTDIATVQQATARHDQASFIEVAALCSGCPI--DD--IVAQLAQAAPGLDIR--ALRH 346

Query: 257 QRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAEVAILKTQGMQSQHVL 316
              +   +VR  +++   +  +I+  A   ++ +++  V E++ E+ IL++ G    HV 
Sbjct: 347 VVEQRMYSVRFAQDLALTVSVVILLTACSMVVMSMLSSVNERKREIGILRSVGFSRAHVF 406

Query: 317 AIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGGSLPVAIDPLQIVLVI 376
           A+F V+    GV    VG   G +LA  +        +    +G       DP+ +VL  
Sbjct: 407 AVFAVEALMVGVASGAVGYASGHVLAGRI--------IDALHLGDGAAPPFDPVWLVLTT 458

Query: 377 VLAIVLSLLATLFPAYRASSVQPAEAL 403
               +LS LA  FPA++AS V+PAEAL
Sbjct: 459 AGIALLSTLAAAFPAWKASRVEPAEAL 485