Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  174 bits (440), Expect = 6e-48
 Identities = 131/410 (31%), Positives = 203/410 (49%), Gaps = 19/410 (4%)

Query: 12  FIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQAV 71
           F+  RYL  R    F   +S MS  G+ +GV SL+ VL VMNGF   L+ +ILG     +
Sbjct: 6   FVAGRYLFARRKQAFISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGANAHVI 65

Query: 72  VTEAAGKTTLSATPPDFVTALSTQRPPE---PLVRSDAVVQSASQLAAGLLIGIEPQQND 128
           V  +  K        + +  +   R  +   P + S+ ++ +   +   +L GI+PQ   
Sbjct: 66  VMSS--KPAAMRDVGELMGRVQDVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQTAP 123

Query: 129 ---PIEQHLIAGRVTALQAGE---YQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGR 182
               I   +  G +  L AG    + + +G  LA  L +T G +V L+  +  Q T  G 
Sbjct: 124 GVLSILSRMTRGGLRDLPAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDG-QKTTTGF 182

Query: 183 LPSQRNFTVAGIFNTGS-DVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
            P  R F VAGIF TG  + D  L    L  A  +L      +SG  +  DD +    + 
Sbjct: 183 APRIRPFRVAGIFTTGMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKADVIG 242

Query: 242 EQPLPQDWQWS----DWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVME 297
           E  L     +     +W E    LF A+++EK  M ++L LIV V +F+I++ L+M+VME
Sbjct: 243 EDVLKASGGYPYYVRNWMEMNANLFAALKLEKTAMFVILALIVLVGSFSIVTTLVMLVME 302

Query: 298 KQAEVAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSL-MEALGVAL 356
           K  ++AIL + G     V  IFM+QG   G IG  +G +LG+ ++  L       L   +
Sbjct: 303 KTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVLGLSVSWALQRYQFIKLPQGV 362

Query: 357 FSVGGSLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
           +S+   LPV +    +  V   A++L  LAT++PA +A++++P EALRYE
Sbjct: 363 YSI-DHLPVLLQWSDLAAVGGAAMLLCFLATIYPARQAAALEPVEALRYE 411