Pairwise Alignments

Query, 406 a.a., lipoprotein-releasing system transmembrane subunit LolC from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (816), Expect = 1e-91
 Identities = 178/405 (43%), Positives = 260/405 (64%), Gaps = 12/405 (2%)

Query: 12  FIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRILGVLPQ-A 70
           ++G RY R R  + F+ F++  + +GI +GV +L+ V SVMNG E QLK RILG +PQ  
Sbjct: 8   YVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQLT 67

Query: 71  VVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEPQQNDPI 130
           VVTEA         P D + AL   +   P V + A+VQSA+ + A  + G+ P+  + +
Sbjct: 68  VVTEAPLSDW--TIPADKLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKL 125

Query: 131 E---QHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLGRLPSQR 187
               QH  +G    L +G+Y++ LG  LAR L V+ GD VRL+  +   ++PLG +PSQR
Sbjct: 126 SMVAQHTYSGAFNELTSGQYKVILGSELARQLKVSPGDTVRLLSGDGVVYSPLGPVPSQR 185

Query: 188 NFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLAE---QP 244
            F V+ +F  GS VD  +   H +DA +L+R  +  I+  RL+  DPF+   LA+   Q 
Sbjct: 186 KFLVSAVFEMGSQVDAGVAYIHYQDAKRLMRQPSDEINQLRLYLSDPFMAPALAKDVKQV 245

Query: 245 LPQ---DWQWSDWREQRGELFQAVRMEKNMMGLMLGLIVGVAAFNIISALIMVVMEKQAE 301
           L Q   +   SDWR+  G LF AV+MEKNMM LML LIV VAAFNI+SAL+M+V++K  +
Sbjct: 246 LTQQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVVDKTTD 305

Query: 302 VAILKTQGMQSQHVLAIFMVQGASSGVIGALVGGLLGVLLAANLNSLMEALGVALFSVGG 361
           VA+LKTQG+++  V+ IF+VQG  + V+G ++G ++G+LL  NLN +M  LG+++   G 
Sbjct: 306 VAVLKTQGLRTSAVMGIFVVQGLLNAVLGLVLGLVVGILLTLNLNGIMATLGISILGTGQ 365

Query: 362 SLPVAIDPLQIVLVIVLAIVLSLLATLFPAYRASSVQPAEALRYE 406
            LPV ++  Q+ ++IV  +V++L+ATL+PA RA+ VQPA ALRYE
Sbjct: 366 VLPVKLELGQLSMIIVGTLVVTLVATLYPALRAARVQPATALRYE 410