Pairwise Alignments

Query, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (484), Expect = 1e-53
 Identities = 100/213 (46%), Positives = 148/213 (69%), Gaps = 4/213 (1%)

Query: 13  TYQEGELQTQVLKGVSFELKRGELVSIIGSSGSGKSTLLHILGALDDASEGQVEFLGQSL 72
           T QEGEL   +L G++ ++K GE V+I+G SGSGKSTLL +L ALD  ++G++   G +L
Sbjct: 17  TTQEGELT--ILNGINLDVKSGESVAILGPSGSGKSTLLGLLAALDSPTKGEIVLDGVTL 74

Query: 73  HQLSSNKQAKIRNQHLGFVYQFHHLLADFSALENVAMPLLIGGMNVAKAKAKAQSLLERV 132
           + L    +A +R Q + F++Q   L+   +ALENV +P  + G  ++ AK KAQ +LERV
Sbjct: 75  NGLDEEGKAALRKQKVSFIFQSFMLVDTLNALENVMLPAELSG--ISNAKQKAQQMLERV 132

Query: 133 GLGHRVAHRPSELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTALSIYDLMRELNR 192
           GL HR+ H P++LSGGE+QRVAIARA + +P ++ ADEPTGNLD   +  + D++ ELNR
Sbjct: 133 GLSHRLNHFPNQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDGANSDRVADMLFELNR 192

Query: 193 ESGTAFLVVTHDGELAAKMDRHMHMKDGLLTDI 225
           ES T  ++VTHD +LA +  R ++M+ G L+++
Sbjct: 193 ESDTTLVLVTHDLQLANRCQRRLNMQAGQLSEV 225