Pairwise Alignments

Query, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (468), Expect = 1e-51
 Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 4/212 (1%)

Query: 13  TYQEGELQTQVLKGVSFELKRGELVSIIGSSGSGKSTLLHILGALDDASEGQVEFLGQSL 72
           T QEG L   +LKG++ ++K+GE V+I+G SGSGKSTLL +L ALD  + G++   G++L
Sbjct: 21  TTQEGSLT--ILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTAGEIWLDGEAL 78

Query: 73  HQLSSNKQAKIRNQHLGFVYQFHHLLADFSALENVAMPLLIGGMNVAKAKAKAQSLLERV 132
             L+  ++A +R Q + F++Q   L+   +ALENV +P  + G  V  AK KA+++L RV
Sbjct: 79  SPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAG--VKNAKEKAEAMLGRV 136

Query: 133 GLGHRVAHRPSELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTALSIYDLMRELNR 192
           GL HR+ H P +LSGGE+QRVAIARA + +P ++ ADEPTGNLD      I D++ ELN+
Sbjct: 137 GLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSVNGHKIADMLFELNQ 196

Query: 193 ESGTAFLVVTHDGELAAKMDRHMHMKDGLLTD 224
           E+ T  ++VTHD +LA +  R + M +G L +
Sbjct: 197 ENHTTLILVTHDLQLAKRCQRQLVMDNGHLQE 228