Pairwise Alignments

Query, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 4e-55
 Identities = 98/219 (44%), Positives = 152/219 (69%), Gaps = 1/219 (0%)

Query: 4   LLRCHQVCKTYQEGELQTQVLKGVSFELKRGELVSIIGSSGSGKSTLLHILGALDDASEG 63
           LL      +++Q GE Q  VLK ++  + RGE+V+I+G+SGSGKSTL++ILG LD  S+G
Sbjct: 5   LLEVSACYRSFQAGEQQLTVLKDINLSIARGEMVAIVGASGSGKSTLMNILGCLDKPSKG 64

Query: 64  QVEFLGQSLHQLSSNKQAKIRNQHLGFVYQFHHLLADFSALENVAMPLLIGGMNVAKAKA 123
                GQ   Q+  ++ AK+R +H GF++Q +HLL D +A+ NV +P +  G +  + + 
Sbjct: 65  AYFIDGQDTSQMDVDELAKLRREHFGFIFQRYHLLGDLNAVGNVEVPAVYAGKDRLERRD 124

Query: 124 KAQSLLERVGLGHRVAHRPSELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTALSI 183
           +A+SLL R+GLG R+ H+P++LSGG++QRV++ARAL+N  D++LADEPTG LD  +   +
Sbjct: 125 RAESLLSRLGLGERLDHKPNQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHSGEEM 184

Query: 184 YDLMRELNRESGTAFLVVTHDGELAAKMDRHMHMKDGLL 222
             L++EL+RE G   ++VTHD  +A   DR + +KDG++
Sbjct: 185 MRLLQELHRE-GHTIIIVTHDMHVAQHADRIIEIKDGVI 222