Pairwise Alignments

Query, 228 a.a., lipoprotein-releasing system ATP-binding protein LolD from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  186 bits (473), Expect = 3e-52
 Identities = 96/222 (43%), Positives = 149/222 (67%), Gaps = 2/222 (0%)

Query: 4   LLRCHQVCKTYQEGELQTQVLKGVSFELKRGELVSIIGSSGSGKSTLLHILGALDDASEG 63
           +++   + KTY  G     VLKG++ +++RGE VSI+G+SGSGKSTLL+ILG LD+   G
Sbjct: 1   MIKLTDINKTYNNGA-PLHVLKGINLDIQRGEFVSIMGASGSGKSTLLNILGILDNYDTG 59

Query: 64  QVEFLGQSLHQLSSNKQAKIRNQHLGFVYQFHHLLADFSALENVAMPLLIGGMNVAKAKA 123
                   +  LS  K A+ RN+ +GF++Q  +L++   A+ENVA+PL   G++  K  A
Sbjct: 60  DYYLNNVLIKDLSETKAAEYRNRMIGFIFQSFNLISFKDAVENVALPLFYQGVSRKKRNA 119

Query: 124 KAQSLLERVGLGHRVAHRPSELSGGERQRVAIARALVNKPDLVLADEPTGNLDHKTALSI 183
            A   L+R+GL     H P+E+SGG++QRVAIARAL+ +P ++LADEPTG LD KT++ +
Sbjct: 120 LALEYLDRLGLKEWAHHMPNEMSGGQKQRVAIARALITQPQIILADEPTGALDSKTSVEV 179

Query: 184 YDLMRELNRESGTAFLVVTHDGELAAKMDRHMHMKDGLLTDI 225
             ++++L+R  G   +VVTH+  +A + D+ +H+KDG++  I
Sbjct: 180 MQILKDLHR-MGMTIVVVTHESGVANQTDKIIHIKDGIIERI 220