Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Pseudomonas stutzeri RCH2

 Score =  117 bits (293), Expect = 6e-31
 Identities = 111/410 (27%), Positives = 179/410 (43%), Gaps = 62/410 (15%)

Query: 27  SLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVLS------VIPHGEFEGV--------- 71
           +L  T GIAVG AVI+   + + G +  +  R L       ++P  E   +         
Sbjct: 25  TLLITFGIAVGSAVIVFITALITGLQANVVERTLGTQAHIRILPPDEVNRILPSDDDSWS 84

Query: 72  ---RGP-------VERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQ 121
                P       +  W D+     +  QI+A +P +   A+A  G    ++ + G+DP 
Sbjct: 85  LVLESPRAQRLRSIINWQDIRDVLDQDAQILAVSPVISGPAIARRGVARASVALLGIDPP 144

Query: 122 REQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKVQA 181
           R Q +  L+  + A     F  G    ++G+ +A  LG+ +GD + L     ++G+  +A
Sbjct: 145 RYQRIIPLANDLIAGR---FVVGAGNAVIGKELARDLGLGIGDKLRL-----DAGEGREA 196

Query: 182 PKRVRVKVSGLLALN-GQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRD 240
                V V+G+  L   ++D     L L+ AQ    L  G+T I   VA++ +A +I R 
Sbjct: 197 V----VDVAGIFELGVRELDARYVYLDLKQAQTLLDLPGGITVIDTTVAEIFEADRIARR 252

Query: 241 VGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAG 300
           +       +   SW +  G L   +        ++ V V    +F I S L ++V  R  
Sbjct: 253 LARLTG--LRAESWMETNGQLLNALSSQSMTTEMIRVFVGISVAFGIASVLAVSVVQRTR 310

Query: 301 EIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVL--GMVVAFNLTPLIKGLEHLIGH 358
           EI ILR MG+  G I R+F+ QG   G+LGS  G  +  G+V  FNL             
Sbjct: 311 EIGILRAMGSPRGQILRVFLLQGGLLGLLGSACGGGVGWGLVQVFNL------------- 357

Query: 359 QFLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPA 408
                 ++ +   P+ V  A +V     A +  +LA   PARRA+R +PA
Sbjct: 358 --FGPRLFEIPVDPTLVPLAMLV-----ATITGVLAAAMPARRAARYDPA 400