Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  338 bits (868), Expect = 1e-97
 Identities = 176/414 (42%), Positives = 262/414 (63%), Gaps = 2/414 (0%)

Query: 3   SSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVLSV 62
           ++L+L++G RF RA+Q N  +SFIS +ST GIA+GVAV+II LSAMNGFEREL+ R L V
Sbjct: 7   AALSLWLGFRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELRERFLDV 66

Query: 63  IPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQR 122
           +PH E  GV  PV  W  ++A A++ P I  AAP++++  LA+     + + + G+D   
Sbjct: 67  VPHAELVGVNEPVHSWQAMVADASKIPGIRGAAPFIRLQGLAQRQGGFQGLSLVGIDTSL 126

Query: 123 EQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIP--SANSGDKVQ 180
           E  VS +  ++   AWQ     +  ++LG+ + EKLG+  GD + L +P  S     K+ 
Sbjct: 127 EGQVSGIESYMPTDAWQALGQDENAIVLGRSLMEKLGLNEGDALVLFVPDLSGRQNGKLG 186

Query: 181 APKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVRD 240
           A +  +  V G   L G+++   A   +        +G  V+G+ + V DV +A +++R+
Sbjct: 187 ATRSHKFVVRGSYHLGGELELVTAYASMAHLARVLEMGEDVSGVRIAVDDVFKAPKLIRE 246

Query: 241 VGNQLNEYVYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAG 300
           +G   ++Y+Y+  W +  G LY+DIQLVRT+MYLV+ LVI VA FNIVSTL+MAV+D+  
Sbjct: 247 LGFTQSQYLYMSDWTRTQGHLYQDIQLVRTLMYLVLALVIAVACFNIVSTLVMAVRDKTS 306

Query: 301 EIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLIGHQF 360
           EIAIL TMG     I  +F+  G  SG+LG+++G   G++VA NL+ L K  E  +G Q 
Sbjct: 307 EIAILMTMGLRRSAIVLVFMVHGAISGLLGTLLGVSAGVLVALNLSGLAKAAESALGVQL 366

Query: 361 LSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVLSSK 414
           LS D+YF+DFLPS++   DV +V+  A+++SLLAT YPA +AS   PA  L+ +
Sbjct: 367 LSSDVYFIDFLPSELHGQDVAVVAAMALLMSLLATLYPAYKASLTEPAPALAGR 420