Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 80.5 bits (197), Expect = 9e-20
 Identities = 73/343 (21%), Positives = 154/343 (44%), Gaps = 22/343 (6%)

Query: 81  LMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQREQAVSRLSQFITAQAWQD 140
           ++A+ ++ P++   +    +  +  S    + I + GVDP  E  V+ ++  IT   W +
Sbjct: 91  VLAELSQIPEVQGVSARFVVQGMLASPRASRGIRINGVDPAAEARVTPIADNITQGDWLE 150

Query: 141 FRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKVQAPKRVRVKVSGLL-ALNGQI 199
              G+  +++ +  A +L +++G  + L   +A+     +A      +V+GL  + +   
Sbjct: 151 -AGGRHPIVISEKTASRLKLRLGSKVVLTFSNAD-----KAVSGAAFRVAGLYRSPSSTF 204

Query: 200 DHSLALLPLEDAQAYAHLGSGVTGISVKVA-----DVLQATQIVRDVGNQLNEYVYLHSW 254
           D + A +   D  A A L  GV  I++++      D  +A  + + + + L+    +  W
Sbjct: 205 DEANAYVRRADLTALAGL-DGVHEIAIRLTKSDSLDNSRAKALAKILLSVLSPQDRVRDW 263

Query: 255 QQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVKDRAGEIAILRTMGATDGL 314
           Q+    L   I  + T   +++++ I      I + ++MAV +R  E  +L  +G     
Sbjct: 264 QEIQPMLATIIAQMDTSNAVILLIFISALGLGIANIMLMAVFERTREFGVLMAIGMVKRK 323

Query: 315 IKRIFVWQGVFSGVLGSVVG---SVLGMVVAFNLTPLIKGLEHLIGHQFLSGDIYFVDFL 371
           I  + + + +  G+ G+++G   SVL + +  N    +  +   +G   +S  +Y     
Sbjct: 324 IMGLILLESLLLGLTGALLGLMLSVLVIALLANTGIPLGNMADGLGAFGVSTTLY----- 378

Query: 372 PSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVLSSK 414
             QV     +      +++SLLA  YPAR+  +  P   +S K
Sbjct: 379 -PQVTLGQYLSTLAMVVIVSLLAALYPARQIVKQRPVDAMSQK 420