Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., lipoprotein releasing system transmembrane protein LolE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  196 bits (497), Expect = 1e-54
 Identities = 126/415 (30%), Positives = 214/415 (51%), Gaps = 24/415 (5%)

Query: 7   LFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVLSVIPHG 66
           L++G R+ RA++ N   SFI+L +  GI +GVA +I+  S MNG E +L+ R+L  +P  
Sbjct: 7   LYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRILGAVPQL 66

Query: 67  EFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQREQAV 126
                + P+  W     +    P +    P V   A+ +S   ++A++V GV P+  + +
Sbjct: 67  TVY-TKAPLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFPELAEKL 125

Query: 127 SRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDKV------Q 180
           S ++Q   + A+ +   GQ QVILG  +A +L V  GD + L+     SGD V       
Sbjct: 126 SAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLL-----SGDGVVYSPLGP 180

Query: 181 APKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSG-VTGISVKVADVLQATQIVR 239
            P + +  VS +  +  Q+D  +A +  +DA+      S  +  + + + D   A  + +
Sbjct: 181 VPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALAK 240

Query: 240 DVGNQLNEY---VYLHSWQQKYGFLYRDIQLVRTIMYLVMVLVIGVASFNIVSTLMMAVK 296
           DV   L           W+  YG L+  +++ + +M L++ L++ VA+FNIVS L+M V 
Sbjct: 241 DVQQILTAQGIEATTSDWRDTYGHLFSAVKMEKNMMSLMLSLIVAVAAFNIVSALVMMVV 300

Query: 297 DRAGEIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNLTPLIKGLEHLI 356
           D+  ++A+L+T G     +  IFV QG+ + VLG  +G V+G+++  NL     GL   +
Sbjct: 301 DKTTDVAVLKTQGLRTSAVMGIFVVQGLLNAVLGLALGLVVGILITLNL----NGLMATL 356

Query: 357 GHQFLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRLNPAQVL 411
           G   L         LP ++    + L+    +V++L+AT YPA RA+R+ PA  L
Sbjct: 357 GISILGAG----QMLPVKLALGQLSLIIVGTLVVTLVATLYPALRAARVQPATAL 407