Pairwise Alignments

Query, 752 a.a., DNA internalization-related competence protein ComEC/Rec2 from Vibrio cholerae E7946 ATCC 55056

Subject, 769 a.a., DNA internalization-related competence protein ComEC/Rec2 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  310 bits (795), Expect = 1e-88
 Identities = 253/789 (32%), Positives = 391/789 (49%), Gaps = 79/789 (10%)

Query: 15  LISFSITVLSAPYWP-WMPSWGWAWLCLIVMVLLGYHRVGRQFLGFVAAILTIVLQGNLI 73
           +  FS T+LSA  WP  +P     +LCL  ++L    +      G + A+  +     ++
Sbjct: 1   MFGFSATLLSAMLWPSLLPIGCLPYLCLGALILF---KKAPSLSGALFAMFWLTGFCLVL 57

Query: 74  RDQSNVLYQAGPDIIIKGRVDSFFTQTRYAYEGFVLIHEVNGQTLNKMTRPRIRLSAPLL 133
             Q   L Q    +  +G + S  +Q    +  F ++ +     L    + R+   +   
Sbjct: 58  SRQDLPLPQQPTQV--RGEIISLVSQNS-DWVSFDIVVDKPNLILGPRAKLRLTWQSEAA 114

Query: 134 LQPNDRVEFSVTLKPIVGRLNQTGFDLEAHYMAQSVVARAVVKPDTAYQIVQESGIRSSL 193
           L+     +F+   K I   LNQ G++ +   ++Q +V +  V   T +   +   +R+ L
Sbjct: 115 LRVGQVWDFTFMPKSISSVLNQGGYNEQKQLISQHIVGKGRVIHATLH--AEYFSLRNHL 172

Query: 194 FFELEQLTHTSPYQGLILALTFGERKGIDEQEWQALRNSGLIHLVAISGLHIGI------ 247
             +L           ++LAL  G+ + I   +WQALR +G  HLV+ISGLH+ +      
Sbjct: 173 ITQLTPKLSGLMQGDILLALILGDEQLISPAKWQALRQTGTGHLVSISGLHLSVITAWIC 232

Query: 248 AFSVGYFLGLGMMRFHAQLLWSPFVCGALLAVLYAWLAGFTLPTQRALIMCLLNVALIML 307
           A ++     L        L+ +  + G+  A+ Y++LAGF +PTQRAL+M LL + L +L
Sbjct: 233 ASALFLLTRLAPHPSRRNLVLALMLAGSS-ALFYSYLAGFAVPTQRALVMILLIMLLSLL 291

Query: 308 AFPLSALKRILLTLVAVLLWSPFASLSNSFWMSFLAVAIVLYQLASQSQ----------- 356
               SA  R+L  L  VLL  P A LS  FW+SF A+AI+LY L S              
Sbjct: 292 RRYSSAWDRLLFALFVVLLIDPLACLSAGFWLSFSALAIILYTLESAQVARSIDSNQTLF 351

Query: 357 -------RQVWWKALLWAQVFLVCLMAPVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPAL 409
                  RQ W  A+ W    L  ++  V A FFGG+S+ ++  N++ +PWFSL+++P  
Sbjct: 352 ATSCVRLRQFW--AIQWR---LSLILGLVQAIFFGGVSIHSLWMNMLVVPWFSLLVIP-- 404

Query: 410 FLGLLLMVVWPSVAAAYWPWV------DWTFLPLDWALQFADV--GWWVVPSKVQGVVAA 461
            L +L  +VW         W+      D + +P    L+ +D   G W   S   G++A 
Sbjct: 405 -LSMLAFLVWWLGELFGQSWMVPFQLADLSLMPFGKLLEVSDELPGHW--HSVSDGMLAL 461

Query: 462 SVAILL---LYRFMSLKA----CSLLLGMIGL---WWWFPSL----TPLWRMDVLDVGHG 507
            + +LL   L+R+M  +       L+ G++ +    + F  +    T  W + +LDVG G
Sbjct: 462 CLCVLLALTLWRYMPHRRQYWQWHLMAGLLCVPMAIFVFQRIAQVETAQWTLHLLDVGQG 521

Query: 508 LAIVIEQDERAIVYDTGSSWPGG-SYVQSVIEPMLQQRGLRQVDGVILSHLDNDHAGDWQ 566
           LA V+E+D RA+VYDTG+++    SY + VI P L  RGL  +D +++SH DNDHAG  Q
Sbjct: 522 LAAVVEKDTRALVYDTGAAFGEDFSYSERVIIPFLNTRGLADIDFIVISHGDNDHAGGAQ 581

Query: 567 GLAERW-QPNWIR-ASQLGTEFMPCIRGESWQWQSLHFTVLWPPQAVSRAYNQHSCVIRM 624
            LA+ + Q NWI     L  +  PC+  +  +WQ L    + P        N  SCV+R+
Sbjct: 582 ALAKAYPQANWITDVDHLNGQ--PCLP-QQIEWQQLTLRFISPQTQAGG--NNASCVLRI 636

Query: 625 TDTQSNHSVLLSGDVTAMGEWLL---ARDGAQLQSEVMIVPHHGSKTSSTAEFIAQVNPK 681
            D Q   S+LLSGD+    E +L    + G  L+S+V+I PHHGS+TSST  FI  V P+
Sbjct: 637 DDGQQ--SLLLSGDIEKETESVLIERVKAGVILKSQVLIAPHHGSRTSSTQAFIDSVAPE 694

Query: 682 LAIASVAKDNRWNLPNPQVVARYQAQQVEWLDTGHAGQISLFFYLDQLDWFTQRSLGWQP 741
           L +     +NR+  P   V+ RYQA+Q+  L TG  GQIS+ F    L+  T R      
Sbjct: 695 LVLFPAGLNNRYGFPKDDVIERYQARQIRHLTTGMEGQISVTFEHGTLEVKTYRRDFAPF 754

Query: 742 WYRQMLRKG 750
           WY ++ R G
Sbjct: 755 WYNRLFRFG 763