Pairwise Alignments

Query, 752 a.a., DNA internalization-related competence protein ComEC/Rec2 from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., DNA internalization-related competence protein ComEC/Rec2 (RefSeq) from Shewanella sp. ANA-3

 Score =  345 bits (886), Expect = 4e-99
 Identities = 268/787 (34%), Positives = 401/787 (50%), Gaps = 75/787 (9%)

Query: 15  LISFSITVLSAPYWP-WMPSWGWAWLCLIVMVLLGYHRVGRQFLGFVAAILTIVLQGNLI 73
           +  FS T+LSA  WP  +P     +LCL  ++L    +      G + A+  +     ++
Sbjct: 5   IFGFSATLLSAMLWPSLLPINSLPYLCLGALILF---KKAPSLSGILFAMCWLTGFCLVL 61

Query: 74  RDQSNVLYQAGPDIIIKGRVDSFFTQTRYAYEGFVLIHEVNGQTLNKMTRPRIRLS--AP 131
             Q   L Q    I ++  + S  +Q        +++ + N   L    R ++RL+  +P
Sbjct: 62  SRQDLPLSQQ--PIQVRAEIISLVSQNSDWVSFDIIVDKPN---LIFWPRAKLRLTWQSP 116

Query: 132 LLLQPNDRVEFSVTLKPIVGRLNQTGFDLEAHYMAQSVVARAVVKPDTAYQIVQESGIRS 191
             +Q      F++  K I   LNQ G++ +   ++Q +V +  V   T         +R+
Sbjct: 117 EAVQVGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRVLHATLE--TSHFSLRN 174

Query: 192 SLFFELEQLTHTSPYQGLILALTFGERKGIDEQEWQALRNSGLIHLVAISGLHIGIAFSV 251
            L  +L     T     ++LAL  G+++ I   +WQALR +G  HLVAISGLH+ +  + 
Sbjct: 175 HLISQLSPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAW 234

Query: 252 GYFLGLGMM-RFHAQLLWSPFVCGALLA----VLYAWLAGFTLPTQRALIMCLLNVALIM 306
            Y   L ++ RF A       V   LLA    + Y++LAGF + TQRAL+M LL + L +
Sbjct: 235 VYVCTLFLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSL 294

Query: 307 LAFPLSALKRILLTLVAVLLWSPFASLSNSFWMSFLAVAIVLYQLASQSQRQV------- 359
           L    SA  R+L  L  VLL  P A LS  FW+SF A+AI+LY L S  + Q        
Sbjct: 295 LRRYSSAWDRLLFALFIVLLLDPLACLSAGFWLSFCALAIILYTLESAPRIQPVEGNATF 354

Query: 360 -----WWKALLWA-QVFLVCLMAPVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGL 413
                   A  W+ Q  L  ++  V A FFGGLSV ++  N++ +PWFSL+++P   L  
Sbjct: 355 RAKARGRLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVPWFSLIVIPLSMLAF 414

Query: 414 LLMVVWPSVAAAYWPW---VDWTFLPLDWALQFAD---VGWWVVPSKVQGVVAASVAILL 467
           +L  V   +  A++      D T LP    L+ +      W  V   + G    ++  L+
Sbjct: 415 ILWWVGTLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALI 474

Query: 468 LYRFMSLKACSLLLGMIGLWWW-------------FPSLT----PLWRMDVLDVGHGLAI 510
           L+R++   +        GLW               FP +T    P W + +LDVG GLA+
Sbjct: 475 LWRYLPHHS------RYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAV 528

Query: 511 VIEQDERAIVYDTGSSWPGG-SYVQSVIEPMLQQRGLRQVDGVILSHLDNDHAGDWQGLA 569
           VIEQD+RA++YDTG+++    SY + V+ P L  +GL QVD +++SH DNDHAG  + LA
Sbjct: 529 VIEQDKRALIYDTGAAFGEDFSYSERVVIPFLNSKGLAQVDYIVVSHRDNDHAGGAEVLA 588

Query: 570 ERW-QPNWIR--ASQLGTEFMPCIRGESWQWQSLHFTVLWPPQAVSRAYNQHSCVIRMTD 626
           + + + NWI   A   G   MPC+  +  QWQ L    + P  A  +  N  SCV+R+ D
Sbjct: 589 KAYPRANWITDVAHLAG---MPCVP-QQIQWQQLTLNFISPQTA--KGGNNASCVLRIDD 642

Query: 627 TQSNHSVLLSGDVTAMGEWLL---ARDGAQLQSEVMIVPHHGSKTSSTAEFIAQVNPKLA 683
               HS+LLSGD+    E +L   A  GA+L+S+V+I PHHGS+TSST  FI  V P+L 
Sbjct: 643 --GAHSLLLSGDIEKETEAVLIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELV 700

Query: 684 IASVAKDNRWNLPNPQVVARYQAQQVEWLDTGHAGQISLFFYLDQLDWFTQRSLGWQPWY 743
           +     +NR+  P P VVARYQA+ +++L TG  GQIS+ F   +L+  T R      WY
Sbjct: 701 LFPSGLNNRYGFPKPDVVARYQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWY 760

Query: 744 RQMLRKG 750
            ++ R G
Sbjct: 761 NRLFRFG 767