Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., ABC transporter ATP-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  283 bits (723), Expect = 2e-80
 Identities = 182/589 (30%), Positives = 308/589 (52%), Gaps = 23/589 (3%)

Query: 10  WQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDE--------------G 55
           W      W  IR     L+V+ + L+ +          LK L+D               G
Sbjct: 15  WAVITTFWPQIRAQWRLLLVAMVTLLADVGLRLLEPWPLKLLIDGVLIPTQTQPSLSLWG 74

Query: 56  FGNAESNFLRILPFMILGLMFV---RGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMP 112
           F N  + +L +L  + +G++ +   R ++ + ++  L+ V   V+ Q+R +L+ H   + 
Sbjct: 75  FTNLNAAWLLML--IAVGVIIIAVSRAIATYWNTVSLAIVGSRVMAQVRDQLYGHLQRLS 132

Query: 113 VRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI 172
           +R+  Q  +G L+ R++ D+ ++      A + +V    ++ G++ +M W   +L+L+ +
Sbjct: 133 LRYHYQARSGDLIIRVSSDANRLQEILLTAALPLVVSLLTLGGMVGVMAWLDLKLTLLSL 192

Query: 173 VVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDK 232
              P+   A + +S + R  S   +   G V S+A + L   K+V +   ++     F +
Sbjct: 193 ATFPLFWLAANRLSAKIRHASLTQRHQEGAVASTAAESLSAIKLVQALSLEQAFADLFSR 252

Query: 233 VSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMF 292
            +    Q+ ++     +  + ++ ++ +     V+       I   LT GT  V  + + 
Sbjct: 253 QNQRSLQENIETKRLAANLERLVDVLIAFGTALVMGYGGHLVIEDALTAGTVLVFLTYLR 312

Query: 293 GLMRPLKALTSVTSEFQRGMAACQTLFGLM--DLETERDNGKYEAERVNGEVDVKDVTFT 350
              +P++     T    +  A+ + +  ++    + +   G   A    G ++ K V+F 
Sbjct: 313 NAYKPVQNFAKYTGRLAKAAASGERILNILAETPDIQDKPGAIPAPFFQGRIEFKYVSFG 372

Query: 351 YQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDY 410
           Y   ++  L  ++ ++  G+ +ALVG SGSGKST+ +L  R YD  +G I +DGHD+RDY
Sbjct: 373 YH-PDQAILDGLNLTVRPGEKIALVGASGSGKSTLLSLLLRLYDPTAGKIFIDGHDLRDY 431

Query: 411 KLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGL 470
           +LT+LR   A+V Q   LF  TI  NIAY  EG  T  +IE AAR A+A +FI  +PQG 
Sbjct: 432 QLTSLRNQMAVVLQESLLFAATIRENIAYGIEGA-TMAEIEAAARLANAHKFILELPQGY 490

Query: 471 DTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNK 530
           DTV+GE GT+LSGGQRQR+AIARA +R  P+LILDE TS LD  +E+ +  AL+ L +N+
Sbjct: 491 DTVVGERGTTLSGGQRQRLAIARAAMRQTPILILDEPTSGLDKVNEQLVFEALERLAENR 550

Query: 531 TVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
           T  ++ H L     AD+IL + +G+I E+G HA+LLA+ G YA L + Q
Sbjct: 551 TTFLVTHNLQLAIAADQILYLYQGQIREQGTHAELLARQGVYADLFQRQ 599