Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  312 bits (800), Expect = 2e-89
 Identities = 176/571 (30%), Positives = 310/571 (54%), Gaps = 4/571 (0%)

Query: 12  TFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMI 71
           ++  LW Y+R     +V + +  ++  A    +  L   +++           R+    I
Sbjct: 12  SYNLLWPYLRPQTKTIVQALLCTLVFTAFWPILAFLAGQMVNLLVQGKVWELARLAAITI 71

Query: 72  LGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYD 131
           +G + +   + +     ++  +  +   +R   + H   + + +F++  TG L  R+T D
Sbjct: 72  VGFL-IHKAAQYGQDSLMAKAALQIAYNLRVNTYRHIQSLSLSYFEKAKTGDLTYRMTED 130

Query: 132 SEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRK 191
            ++V    ++           +I +L+ M + +W L+L ++V+AP++ F + +  ++   
Sbjct: 131 IDRVGEVVNKVFHDATPSILQLIVVLSYMIYLNWTLTLAILVIAPIMGFLVGWFGQQMLV 190

Query: 192 ISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251
            SR  Q+ +  ++S   ++  G ++V ++  +  E +RF + +   R+   +    ++I 
Sbjct: 191 FSRRSQSRISDLSSLLTEVFSGIRLVRAFAAEPYEIERFSREAERNREARYRTAWLRAIQ 250

Query: 252 DPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRG 311
            PVI  + + ++  ++ L S      +L         +A+  L+ P+  L    +EF++G
Sbjct: 251 YPVIGFLQAASILFIVVLGSWQISTGQLNGPNLGSYVAAIAMLIDPIVHLIDNFNEFKQG 310

Query: 312 MAACQTLFGLMDLE--TERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQG 369
            A+   +  L+ +E   + D        + G+V+ + V+F+Y+    P L  ++ ++  G
Sbjct: 311 QASLDRIDELLSIEPAVQEDPQSRMLPPITGKVEFRQVSFSYRSDSAPVLRQLNLTVEPG 370

Query: 370 KTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLF 429
           + VALVG SG+GKST+ NL  RFYD   G I +DG  +R   L +LRR   +V Q   LF
Sbjct: 371 EAVALVGASGAGKSTLVNLIPRFYDPQDGEILVDGIPIRSVTLGSLRRQIGIVPQETILF 430

Query: 430 NDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRV 489
           + TIA NIA+  + ++ R  +E+AAR A+A +FI  MP G DT +GE G +LSGGQRQR+
Sbjct: 431 SGTIAQNIAFG-QRQFDRAAVEEAARIANAHQFISQMPDGYDTWVGERGVNLSGGQRQRL 489

Query: 490 AIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEIL 549
           AIARA+L D  +LILDEATSALD+ESE  +Q AL+ + + +TV +IAHRL+T+  A  IL
Sbjct: 490 AIARAVLLDPRILILDEATSALDSESETLVQEALERVMQGRTVFIIAHRLATVRNASRIL 549

Query: 550 VVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580
           V++ G+I+E G H  LLA+ G YA+ +  QF
Sbjct: 550 VMERGQIVEAGNHDALLAEAGRYARYYAQQF 580