Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  340 bits (871), Expect = 1e-97
 Identities = 193/557 (34%), Positives = 317/557 (56%), Gaps = 5/557 (0%)

Query: 26  GLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFAS 85
           G   +   LV+ AA   +   +++ +++E F N  ++ + ++   I     +RGL+ +  
Sbjct: 34  GYAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQ 93

Query: 86  SYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVS 145
           +  LS +  N+V + +RRL+ H M + V +F +  +  L ++++ +   +    +  + S
Sbjct: 94  AVALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTS 153

Query: 146 IVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTS 205
           I R+  ++IGL+ +MF   W LSL++  VAP +   + ++S+R R  +R        V  
Sbjct: 154 IARDLLTLIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLG 213

Query: 206 SAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFA 265
           + ++ ++G  +V ++  +   R++ + + +    +  ++        P+ +  A LA+ +
Sbjct: 214 AMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISS 273

Query: 266 VLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLE 325
           VL  A+  +I   + PG F    +A+     P + L  +    +R     + ++ ++D  
Sbjct: 274 VLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTV 333

Query: 326 TERDNGKYEAERVNGE--VDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKS 383
             + +     E   GE  V+++DV F Y G  +  L  VSF    GKT ALVG SG+GKS
Sbjct: 334 PHQRDRPDATELRLGEATVELRDVRFAY-GTGEEILKGVSFRAEGGKTTALVGPSGAGKS 392

Query: 384 TIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEG 443
           TI +L  RFYD  SG I +DG ++      +LR   A VSQ  +LF  +I +NI Y    
Sbjct: 393 TIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGRP- 451

Query: 444 EYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLI 503
           + T  +IE+AAR A+A +FI   PQG DT +GE+G +LSGGQRQR++IARAL+R+APVL+
Sbjct: 452 DATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAPVLL 511

Query: 504 LDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHA 563
           LDEATSALDTESE A+Q AL+E    +TV+VIAHRLST+  AD+I+V+ EG ++E G H 
Sbjct: 512 LDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVEEGSHE 571

Query: 564 DLLAQ-DGAYAQLHRIQ 579
           +L  + DG YA+LH +Q
Sbjct: 572 ELARRPDGLYARLHNLQ 588