Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  283 bits (723), Expect = 2e-80
 Identities = 203/591 (34%), Positives = 308/591 (52%), Gaps = 38/591 (6%)

Query: 11  QTFKRLWTYI----RL-YKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLR 65
           +T   LW Y+    R+  K  +V +T+ LVI  A    +    K   D    N + + L 
Sbjct: 16  ETIANLWPYMWPADRIDLKLRVVWATVILVIAKAVLVLVPYFFKWATDAL--NNKPDALG 73

Query: 66  ILPFMILGLMFV-----------RGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVR 114
            LP  + G + +            GL+    +   S V  + V Q+  + F H   + +R
Sbjct: 74  FLPQFLTGAVMLVLAYNLARLLQAGLNQLRDALFAS-VGQHAVRQLAYKTFVHMHQLSLR 132

Query: 115 FFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLL--TLMFWNSWQLSLVLI 172
           F  +  TGGL SRI        G  +    +I+    ++I  L   ++FW  +  + +L+
Sbjct: 133 FHLERRTGGL-SRII--ERGTKGIETIVRFTILNSVPTLIEFLLTAVIFWWGYGFTYLLV 189

Query: 173 VVAPV---VAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKR 229
               V   + F +     R   I R+M  +     + A   L   + V  +G +E+E KR
Sbjct: 190 TAVTVWLYIWFTVRASDWRIA-IRRSMNDSDTDANTKAIDSLLNFETVKYFGNEEMEAKR 248

Query: 230 FDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFS 289
           FDK      +   ++ ++    +    +I       ++ ++++   R E T G F  + +
Sbjct: 249 FDKSMERYERAATQVWTSLGWLNFGQALIFGAGTAVMMTISALAVQRGEQTIGDFVFINA 308

Query: 290 AMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE---RDNGKYEAERVNGEVDVKD 346
            +  L  PL  +  V  E ++G+   + +F L+D+  E   R N K E +   G +  K+
Sbjct: 309 MLIQLAIPLNFIGFVYREIRQGLTDIEHMFDLLDVRAEVVDRPNAK-ELKIERGAIAFKN 367

Query: 347 VTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHD 406
           V F Y    +P L  +SF +P GKTVA+VG SG+GKST++ L  RFYDV  GSI +DG D
Sbjct: 368 VQFAYD-PARPILKGISFEVPAGKTVAVVGPSGAGKSTLSRLLYRFYDVQEGSITIDGQD 426

Query: 407 VRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTRE--QIEQAARQAHAMEFIE 464
           VRD    +LR    +V Q+  LFNDTIA NI Y   G  T    ++E AA  A   +FI 
Sbjct: 427 VRDVTQKSLRSVIGMVPQDTVLFNDTIAYNIRY---GRVTASDAEVEAAAEAAQIADFIR 483

Query: 465 NMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALD 524
           ++P+G   ++GE G  LSGG++QRVAIAR +L+  P+LILDEATSALDT++E+ IQAALD
Sbjct: 484 DLPEGFRAMVGERGLKLSGGEKQRVAIARTILKAPPILILDEATSALDTKTEQEIQAALD 543

Query: 525 ELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQL 575
            + +N+T LVIAHRLST+  ADEI+V+ +G I ERG H +L+ + G YA +
Sbjct: 544 IVSRNRTTLVIAHRLSTVINADEIIVLKDGVIAERGTHGELIDRGGLYASM 594