Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., lipid ABC transporter permease/ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  339 bits (869), Expect = 2e-97
 Identities = 191/559 (34%), Positives = 315/559 (56%), Gaps = 5/559 (0%)

Query: 26  GLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFAS 85
           G   +   L++ AA   +   + + +++E F +   + + ++ F I     +RGL+ +  
Sbjct: 34  GYAFAIACLMVVAATTAFTAWISETVINEAFAHKRGDVVLLVCFSIFAAFVLRGLATYGQ 93

Query: 86  SYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVS 145
           +  LS +  ++V   +RRL+ H M + + FF ++ +  L ++I  +   +    +  + S
Sbjct: 94  AVALSKIGNSIVASYKRRLYTHLMALSIGFFQEKRSAHLTAKINQNISGIRDVLNMTVTS 153

Query: 146 IVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTS 205
           + R+  +++GL+ +M    W LSL+  V AP +   + ++S+R R  +R    A   V  
Sbjct: 154 VARDVLTLVGLVGVMISKDWLLSLITFVGAPPLLLGLRYISRRLRLATREAVEANSRVLG 213

Query: 206 SAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFA 265
           + ++ ++G  +V ++  ++   ++ + +      +  ++        P+ +  A LA+  
Sbjct: 214 AMQETIQGISIVKAFTMEDELGRKVEGIIKGAENRANRIARLSERTAPLTETFAGLAISG 273

Query: 266 VLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMD-L 324
           VL  A+  +I + + PG      +A+     P++ L  +    +R     + L+ ++D +
Sbjct: 274 VLAYAAFRTIYSNVAPGALFAFVTALLLAYDPVRRLARLQVSLERAAVNARMLYEILDTV 333

Query: 325 ETERD-NGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKS 383
             +RD  G  +       V+ +DV F+Y G  +  L  VSF    GKT ALVG SG+GKS
Sbjct: 334 PHQRDLPGARQLAFSEATVEFRDVRFSY-GNGEEVLKGVSFLAEGGKTTALVGPSGAGKS 392

Query: 384 TIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEG 443
           TI +L  RFYD  SG I +DG D+      +LR   A VSQ  +LF  +I +NI Y    
Sbjct: 393 TIISLIPRFYDPQSGVILIDGQDIAAVTKQSLRNGLAYVSQQAYLFEGSIRDNIRYGRP- 451

Query: 444 EYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLI 503
           E T  ++E+AAR A+A +FI   PQG DT +GE G +LSGGQRQR++IARAL+R+AP+L+
Sbjct: 452 EATDAEVEEAARLAYAHDFILAQPQGYDTPVGEQGMTLSGGQRQRLSIARALVRNAPILL 511

Query: 504 LDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHA 563
           LDEATSALDTESE A+Q ALD+    +TV+VIAHRLST+  AD+I+V++EG ++E G H 
Sbjct: 512 LDEATSALDTESEAAVQKALDQAMSGRTVIVIAHRLSTVVNADKIVVMNEGLVVEEGTHE 571

Query: 564 DLLAQ-DGAYAQLHRIQFG 581
           +L  + DG YA+LH IQ G
Sbjct: 572 ELARRPDGVYARLHNIQGG 590