Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., ATP-binding cassette domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  277 bits (709), Expect = 9e-79
 Identities = 177/562 (31%), Positives = 294/562 (52%), Gaps = 17/562 (3%)

Query: 23  YKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSG 82
           YK  L      +V+    +  M   LK L+D+  G  + + L    + IL ++   G++G
Sbjct: 139 YKKMLAFVVFGVVVETLFNVIMPLSLKFLIDDALGEEDFHEL----YKILSIL---GVAG 191

Query: 83  FASSYCLSW-------VSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQV 135
             +S    W       +S  V+  +R RLF H   +P  +F +   G +LSR + D    
Sbjct: 192 VITSIIAVWYERWDARLSAAVISDVRTRLFEHTQRLPAGYFARTKRGEILSRFSIDMAAF 251

Query: 136 AGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRN 195
           +        + +     +I  + LM + +WQL++V +++ P+       ++ +  + +  
Sbjct: 252 SRVVEILANTALLPFLELIAGIILMLFLNWQLAVVALLIFPITLIGPRILTPKAVQANYE 311

Query: 196 MQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVI 255
            +     +    ++ +    VV ++  Q      F   + + RQ+  +     S+ +  +
Sbjct: 312 QKVQEAGLLGLLQENVGAQAVVKAFSLQRKMFGFFSLRNQATRQKMGQATFLTSMVERSV 371

Query: 256 QMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAAC 315
            +   +    VL L +  +   ++T GTF    SA + +   +  L        +  AA 
Sbjct: 372 TVSVLMLHLLVLALGAYLATTGQITVGTFVTFESAFWEVSYNIAHLMQFIPVSIQAAAAV 431

Query: 316 QTLFGLMDLETERDN--GKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVA 373
           + +  L+D +T   +  G  E  R+   +  + V+F Y+G E+P + ++S  +  GKT+A
Sbjct: 432 RHMQELLDEKTPISDKPGAAEMPRIVDNIAFERVSFAYEGAEQPVIDNLSLKLKAGKTIA 491

Query: 374 LVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTI 433
           +VG SGSGKST+ N+  R YD   G I +DG D+R+  L +LRR  A+V Q   LFN +I
Sbjct: 492 IVGPSGSGKSTLLNMVLRLYDPTEGRISIDGVDIRNVTLDSLRRSMAVVFQENMLFNMSI 551

Query: 434 ANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIAR 493
            +NI    EG  T  ++EQAA++A    +I ++PQ  DTV+GE G +LSGGQRQR+AIAR
Sbjct: 552 RDNIRLGKEGA-TDAEVEQAAKKAEIHRYIMSLPQKYDTVVGERGDTLSGGQRQRIAIAR 610

Query: 494 ALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDE 553
           A++RD  VL+LDEATSALD  +E AI   L +L + +T++   HRL+++   DEI+VV  
Sbjct: 611 AIVRDPSVLLLDEATSALDQTTEAAINKTLMKLARGRTMIFSTHRLTSVVDMDEIVVVSG 670

Query: 554 GEIIERGRHADLLAQDGAYAQL 575
           G+ IERG H +LLA++GAY +L
Sbjct: 671 GQAIERGSHKELLAKNGAYRKL 692