Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  327 bits (839), Expect = 6e-94
 Identities = 203/573 (35%), Positives = 327/573 (57%), Gaps = 14/573 (2%)

Query: 16  LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLM 75
           LW ++R Y+  + ++T+ALV+ A     +   ++ ++D  F  +E+  L    +    L+
Sbjct: 26  LWPFMRPYRVLMAMATLALVLTAGLSLTLPLAVRRVVDN-FRISEAALLN--QYFAAALV 82

Query: 76  FVRGLS-GFASSYCLSWVSGN-VVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSE 133
               L+ G    Y L    G  VV  +R+ +F+  + M   FF+Q  TG +LSRIT D+ 
Sbjct: 83  IAALLAVGTGLRYALVTRLGERVVADIRKAVFDRVIGMSPAFFEQIMTGEVLSRITTDTT 142

Query: 134 QVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKIS 193
            +      ++   +R     IG L LM   S +L+ +++++ P V   I  + +R RKIS
Sbjct: 143 LIQSVLGSSVSIALRNMLIFIGGLVLMLLTSAKLTSLVLLIVPAVIVPILVLGRRLRKIS 202

Query: 194 RNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253
           R  Q  +   + +A + L   + V +Y  +   R  F +++ +    +M+ +  ++    
Sbjct: 203 RENQDWIAASSGNAGEALGAVQTVQAYTHEVASRSEFSRLTETAFDVSMRRIQTRAFLTV 262

Query: 254 VIQMIASLALFAVLFLASVDSIRAELTPGTFT--VVFSAMFGLMRPLKALTSVTSEFQRG 311
           ++  +    +  VL++ + D     ++ GT    V+++ +  +   + AL+ + SE QR 
Sbjct: 263 IVIFLVFSGVVGVLWMGANDVRAGIMSEGTLVQFVIYAVL--VAGSVAALSEIWSELQRA 320

Query: 312 MAACQTLFGLM---DLETERDNGKYEAERVNGEVDVKDVTFTYQGKEK-PALSHVSFSIP 367
             A + L  L+   D   +    +  A  V GE+   DV+F Y  + + PAL  VS ++ 
Sbjct: 321 AGATERLVELLTAVDQVQDPYAPRALAAPVRGEIRFDDVSFRYPARPQIPALVDVSLTVQ 380

Query: 368 QGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVH 427
            G+TVA VG SG+GK+TI  +  RFYD  SG++CLDG  +RD +  + R+H ALV Q+  
Sbjct: 381 PGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQRDDFRQHIALVPQDPV 440

Query: 428 LFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQ 487
           +F  +  +NI +   G    E +E AAR A A +FI  +P+G D+ +GE G  LSGGQ+Q
Sbjct: 441 IFALSARDNIRFGRPGASDAE-VEAAARAAAAHDFISALPEGYDSQVGERGVMLSGGQKQ 499

Query: 488 RVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADE 547
           R+AIARA+LRDAPVL+LDEATSALD ESER +QAA+DEL + +T L++AHRL+T+++AD 
Sbjct: 500 RIAIARAILRDAPVLLLDEATSALDAESERLVQAAVDELSQGRTTLIVAHRLATVKKADR 559

Query: 548 ILVVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580
           I+V++EG II  G H  L+A+DG YA+L R+QF
Sbjct: 560 IVVMEEGRIIATGTHDQLVAEDGLYARLARLQF 592