Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., ABC-type multidrug transport system, ATPase and permease component from Dechlorosoma suillum PS

 Score =  311 bits (798), Expect = 5e-89
 Identities = 197/586 (33%), Positives = 315/586 (53%), Gaps = 14/586 (2%)

Query: 3   LHSDESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDE---GFGNA 59
           L++  S W  F RLW + R Y+  L+   I  +I+ AA      +  PL+DE    + N 
Sbjct: 140 LYTPPSTWTLF-RLWRFARPYRGQLLAGFILTLISTAATLVAPYMTMPLMDEVLIPYQNG 198

Query: 60  ESNFLRILPFMILGLMFVRGLS---GFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFF 116
           +      + F + GL+    L+   G+A +Y L+ VS  +   +R + + H + + + +F
Sbjct: 199 QPLDTGKVYFYLGGLLGSALLAWGLGWAKTYILALVSERLGADLRSQTYEHLLKLSLEYF 258

Query: 117 DQESTGGLLSRITYDSEQVAGATSRALVSIVREGASI-IGLLTLMFWNSWQLSLVLIVVA 175
             + TG L++RI  +S+++    S  L+    +   I +  + L+  N W L+ V ++  
Sbjct: 259 GGKRTGDLMARIGSESDRICVFLSLYLLDFFTDVLMITMTAVILVSINPW-LAAVTLIPL 317

Query: 176 PVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSN 235
           P + + I  V  + R     +      VTS     + G +VV ++  ++ E  RF   + 
Sbjct: 318 PFIVWLIHVVRDKLRHGFEQIDRVWSGVTSVLADTIPGIRVVKAFAQEKRETSRFKDANQ 377

Query: 236 SMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLM 295
              +   ++    S+  P I ++  + L  V  L      + ++T GT     + +    
Sbjct: 378 RNLEANDRVNRLWSLFSPTITLLTEVGLLIVWGLGIWLVTKNQVTVGTLAAFLAYIGRFY 437

Query: 296 RPLKALTSVTSEFQRGMAACQTLFGLMD--LETERDNGKYEAERVNGEVDVKDVTFTYQG 353
             L +++ + S  Q+  +  + +F ++D               +V G + V+ V F Y  
Sbjct: 438 TRLDSMSRIVSHTQKAASGAKRIFDILDHVSSVPEPVKPQHLTKVEGGITVERVGFRYGN 497

Query: 354 KEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLT 413
           +    L  V   I  G+ + LVG SGSGKST+ NL  RFYDV  G+IC+DG DVR+  ++
Sbjct: 498 RT--VLRGVDLKINPGEMIGLVGHSGSGKSTLVNLICRFYDVGEGAICIDGVDVRNIPVS 555

Query: 414 NLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTV 473
             R+H  LV Q   LF  TIA NIAY  + + +RE+I  AAR AHA EFI  +P G D++
Sbjct: 556 EYRKHIGLVLQEPFLFFGTIAENIAYG-KPDASREEIVAAARAAHAHEFILRLPHGYDSL 614

Query: 474 IGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVL 533
           +GE G +LSGG+RQR++IARALL D  +LILDEATSA+DTE+E  IQ ALD L K +T +
Sbjct: 615 VGERGQALSGGERQRISIARALLIDPKILILDEATSAVDTETELEIQGALDNLIKGRTTI 674

Query: 534 VIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
            IAHRLST+ +AD ++V+D G ++E G+H +L+A++GAY +L+  Q
Sbjct: 675 AIAHRLSTLRKADRLVVMDRGVVVEEGQHDELIAKEGAYYRLYTAQ 720