Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., lipid A export permease/ATP-binding protein MsbA from Dechlorosoma suillum PS

 Score =  494 bits (1273), Expect = e-144
 Identities = 260/569 (45%), Positives = 377/569 (66%), Gaps = 1/569 (0%)

Query: 15  RLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRI-LPFMILG 73
           RL  Y+R Y   + +S  A  I AA +    +L+KPLLD+GF  + S    I +P  I+G
Sbjct: 14  RLLGYVRPYWKAVALSLGATAILAATEPLFPALMKPLLDDGFIKSGSFGNPIWIPLGIVG 73

Query: 74  LMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSE 133
           +  +R +  + SSY  SWVS  VV  +R  ++   + +P+ +F +  +   L++I YD  
Sbjct: 74  VFILRSIFSYFSSYGFSWVSNRVVTDIRDEMYQRLVRLPIAYFQKHGSSVPLTKIAYDVN 133

Query: 134 QVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKIS 193
            VA A +  +V+I+R+G S++GLL  + W +WQL+LV   + P +A+++   S R R+ S
Sbjct: 134 GVAVAATNVVVTILRDGLSVVGLLGWLLWLNWQLTLVCFALIPAIAWSMRTFSWRMRRAS 193

Query: 194 RNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253
           R  Q A+  +  + ++     +V+  +GG+  E  RF +++N +R+Q M+   A S   P
Sbjct: 194 RGSQEAVARMVEALQETSHCARVIKVFGGEAQEAGRFGQINNEVRRQGMRQAVASSATSP 253

Query: 254 VIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMA 313
           +  + AS+AL  V+++A   S     + G+F    +A+  L+ PL+ L  V++  QRG+A
Sbjct: 254 ITHIFASIALAIVVYVALTQSASGSTSVGSFVSFITALLMLLAPLRRLADVSAPLQRGLA 313

Query: 314 ACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVA 373
           + +++F L+D   E D G+    R  G + ++ VTF Y G E+ AL+ VS  I  G+TVA
Sbjct: 314 SAESVFQLLDEAPEADPGQTRLGRAEGRITLEQVTFRYPGAERDALAGVSLDIAPGQTVA 373

Query: 374 LVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTI 433
           LVG+SG GKST+A L  RFY+ DSG + LDGHD+++  L +LRR+ A VSQ+V LFNDT+
Sbjct: 374 LVGQSGGGKSTLAALVPRFYNPDSGCLRLDGHDLQELSLESLRRNIAYVSQDVLLFNDTV 433

Query: 434 ANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIAR 493
           A NIAY A  + +REQIE AA  AHA++FI  +P+G DTVIGENG  LSGGQRQR+AIAR
Sbjct: 434 AANIAYGATADASREQIEAAAEAAHALDFIRALPEGFDTVIGENGNRLSGGQRQRLAIAR 493

Query: 494 ALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDE 553
           ALL+DAPVLILDEATSALD ESERA+QAAL+ L +N+T LVIAHRLSTIE AD+I+V+ +
Sbjct: 494 ALLKDAPVLILDEATSALDNESERAVQAALETLMQNRTTLVIAHRLSTIESADKIVVLAQ 553

Query: 554 GEIIERGRHADLLAQDGAYAQLHRIQFGE 582
           G I+E+G HA+LLA++GAYA L+R+QF E
Sbjct: 554 GAIVEQGTHAELLAREGAYASLYRLQFAE 582