Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., Probable drugs-transport transmembrane ATP-binding protein ABC transporter from Mycobacterium tuberculosis H37Rv

 Score =  278 bits (711), Expect = 5e-79
 Identities = 161/508 (31%), Positives = 269/508 (52%), Gaps = 2/508 (0%)

Query: 70  MILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRIT 129
           + L L     L  +A +  L+      ++++R  + +    +P+ +FD +  G LLSR+T
Sbjct: 125 LALALYLAAALMIWAQARLLNLTVQKTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVT 184

Query: 130 YDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRF 189
            D + +  + S  +  +V    +++ +L +M   S  L+L+ ++  P+       +++R 
Sbjct: 185 NDIDNLQSSLSMTISQLVTSILTMVAVLAMMVSISGLLALITLLTVPLSLLVTRAITRRS 244

Query: 190 RKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQS 249
           + +     T+ G + +  E+   G  VV ++G Q   R+RF ++++ + Q          
Sbjct: 245 QPLFVAHWTSTGRLNAHLEETYSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSG 304

Query: 250 IADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQ 309
           +  P    I +L   AV     +     ++T G+       +     PL  L  + +  Q
Sbjct: 305 LVQPATAFIGNLGYVAVAVAGGLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQ 364

Query: 310 RGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQG 369
            G+A+ + +F ++D   E    + E   + G V+ + V F Y     P +  +S     G
Sbjct: 365 SGVASAERVFDVLDEPEESPEPEPELPNLTGRVEFEHVNFAYL-PGTPVIRDLSLVAEPG 423

Query: 370 KTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLF 429
            TVA+VG +G+GK+T+ NL  RFY++ SG I +DG D+      +LR    +V Q+  L+
Sbjct: 424 STVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLY 483

Query: 430 NDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRV 489
           + TIA NIAY    E T ++I +AAR AH   F+  +P G  T +  +G S+S G++Q +
Sbjct: 484 DGTIAENIAYGRP-EATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLI 542

Query: 490 AIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEIL 549
            IARA L    +LILDEATS++DT +E  IQ A+ EL++++T  +IAHRLSTI  AD IL
Sbjct: 543 TIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHIL 602

Query: 550 VVDEGEIIERGRHADLLAQDGAYAQLHR 577
           VV  G+I+ERG HA+LLA+ G Y Q+ R
Sbjct: 603 VVQTGQIVERGNHAELLARRGVYYQMTR 630