Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., lipid A ABC transporter ATPase/inner membrane protein from Marinobacter adhaerens HP15

 Score =  299 bits (765), Expect = 2e-85
 Identities = 192/559 (34%), Positives = 303/559 (54%), Gaps = 18/559 (3%)

Query: 32  IALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPF---MILGLMFVRGLSGFASSY 87
           +AL+  A     +   L+ L+D+G    +  N  R +     ++LGL F      FA  Y
Sbjct: 1   MALIFTAGITLGLGQGLRILVDQGLATESPENLARAIGLFFILVLGLAF----GSFARFY 56

Query: 88  CLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIV 147
            +SW+   VV  +R+++FNH + +   FF+Q     + SR T D+  +       +   +
Sbjct: 57  LVSWIGERVVADIRKKVFNHLIDLHPGFFEQNRALEIQSRFTADTTVLQSVIGSTVSIAL 116

Query: 148 REGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSA 207
           R    ++G        +     +     P +A  I F  +R R +SR  Q  +  V S  
Sbjct: 117 RNALMLVGGCCCCSSPTPNWRALFCWAFPWIA-PILFYGRRVRALSRLSQDRVADVGSYV 175

Query: 208 EQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVL 267
            + L   K V ++  Q  +RK F +VS    +   + +  ++    +   +   A+  V+
Sbjct: 176 GENLTQIKTVQAFNHQPHDRKYFSEVSERAFEIARQRIRQRAWLTTLAISLVMGAVGIVI 235

Query: 268 FLASVDSIRAELTPGTFT--VVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLE 325
           ++  +D I   ++PG     V +S + G+     A++ V  E QR   +   LF L+  E
Sbjct: 236 WIGGLDVIHGRISPGELAAFVFYSLLVGVAAG--AISEVIGELQRAAGSAARLFELLQTE 293

Query: 326 T---ERDNGKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSG 381
                + + +   E V G + ++ ++F+Y G+ E+PAL+ +S  +  G+T+ALVG SG+G
Sbjct: 294 PAFERKASTQTLPEHVQGAIRIERLSFSYPGRLEQPALTDLSLEVRAGETLALVGPSGAG 353

Query: 382 KSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAA 441
           KST+ +L   FY    G I LDG D  D  L  LRR F+LV QN  LF+ T+A+NI YA 
Sbjct: 354 KSTLFDLLLHFYQPTEGRILLDGVDTADLSLDALRRCFSLVPQNPALFHGTVADNIRYAR 413

Query: 442 EGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPV 501
             + +++ +EQAA+ AHA +FI+++P+G  T +G+ G  LSGGQ+QR+AIARALL DAPV
Sbjct: 414 P-DASQQDVEQAAKVAHAHDFIQSLPKGYGTPLGDAGLGLSGGQKQRLAIARALLADAPV 472

Query: 502 LILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561
           L+LDEATSALD ESE  IQ A+  L   +T LVIAHRL+T+  AD I V+D+G ++  G 
Sbjct: 473 LLLDEATSALDAESENLIQQAMPALTAGRTTLVIAHRLATVRDADRIAVMDQGRLLAVGT 532

Query: 562 HADLLAQDGAYAQLHRIQF 580
           H +L+  +  Y +L ++QF
Sbjct: 533 HDELMRHNALYQRLAKLQF 551