Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  372 bits (955), Expect = e-107
 Identities = 199/571 (34%), Positives = 341/571 (59%), Gaps = 5/571 (0%)

Query: 14  KRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILG 73
           +R+  Y   +K  + +S   + I +A       L+KP LD+ F N +   L ++P   + 
Sbjct: 16  RRIGRYFLPHKVSIALSMGCMAIVSATTAGTAYLIKPALDDIFINKDEQALLLVPAFFIV 75

Query: 74  LMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSE 133
           L  ++G   +  +Y +++    V+  +R +LF   +H+P+RF++    G L+SRI  D  
Sbjct: 76  LTALKGFGRYFQNYFMNYAGLRVIESLRDQLFTKIIHLPMRFYEDSQIGLLMSRIINDVS 135

Query: 134 QVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKIS 193
            +  +   + V IVR+  +++GL+ ++F+ + +L+   ++V P+  +   +  ++ RK+ 
Sbjct: 136 MIRDSLP-STVMIVRQILTMVGLIGVVFYQNAELATWAVLVLPLALYPFIYFGRKLRKLG 194

Query: 194 RNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253
           R  Q  +  ++   +++  G +VV ++  ++ E  RFD  +  + + T+K +    ++ P
Sbjct: 195 RRNQEKLADISVILQEVFSGIRVVKAFATEKEEAHRFDAENQRLVKLTLKQICVSELSSP 254

Query: 254 VIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMA 313
           V+++I +L +  V+     + I  + TPGTF    +A+  L  P+K+L+    E QR + 
Sbjct: 255 VMELIGALGIGLVILYGGHEVISGKTTPGTFFSFMAALVMLYDPIKSLSMANREVQRALV 314

Query: 314 ACQTLFGLMDLETE--RDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKT 371
             + +F ++D E      +G  +  R   EV +KDV+F Y     PAL  ++  +  G+ 
Sbjct: 315 GAERVFEILDAEDLCIETSGDLKFNRDFKEVCIKDVSFAY-ADGSPALRDINLCVRAGER 373

Query: 372 VALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFND 431
           VA+VG SG+GK+T+ NL  RFY+  SG I +DG  ++D+ L +LRR  ++VSQ+  LFN 
Sbjct: 374 VAIVGPSGAGKTTLVNLIPRFYEPSSGCIEIDGVPLQDFDLADLRRSISVVSQDAFLFNL 433

Query: 432 TIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI 491
           ++++NI Y         +IE AA  A A EF++ + QG DTV+GE G  LSGGQ+QR+ I
Sbjct: 434 SVSDNITYGTPN-VGAGRIEAAAHAAFAHEFVQQLAQGYDTVLGERGVKLSGGQKQRLTI 492

Query: 492 ARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVV 551
           ARALL+DAP+LILDEATSALD+++ER +Q ALD L +N+T +VIAHRLST+  AD I+V+
Sbjct: 493 ARALLKDAPLLILDEATSALDSQAERIVQKALDNLMENRTSIVIAHRLSTVLNADRIVVM 552

Query: 552 DEGEIIERGRHADLLAQDGAYAQLHRIQFGE 582
           ++G ++++G HA+LL +   Y +L+ IQFG+
Sbjct: 553 EDGRVVDQGPHAELLGRCELYTRLYSIQFGQ 583