Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  288 bits (738), Expect = 3e-82
 Identities = 183/572 (31%), Positives = 308/572 (53%), Gaps = 9/572 (1%)

Query: 16  LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLM 75
           L  ++  +K   + +   L+ + AA   +    K ++D GF   +   +      +  + 
Sbjct: 45  LLPFVIAHKGDGLAAGFFLLFSTAATLGLTYAFKNVIDHGFSKGQDAAINSAFVGLGAVA 104

Query: 76  FVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQV 135
            V  L+     + ++ +   VV  +RR+L+ H + +   +F +  TG +LSR+T D   V
Sbjct: 105 LVLALATALRFFFITRLGERVVADLRRKLYGHTLSLDQPYFLKTRTGEVLSRLTTDVALV 164

Query: 136 AGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRN 195
                 ++   +R   ++IG LT M   S +L+  ++++ PV+   +  V +R RK++  
Sbjct: 165 EQLVGASISIALRNILNLIGGLTAMAVVSPKLAGFIVLMVPVILAPMFLVGRRVRKLTVT 224

Query: 196 MQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVI 255
            Q         A + L   + V ++G +     RF     +  + +++ ++ ++    ++
Sbjct: 225 AQDRFADAVGYAGESLDALETVQAFGRESASSGRFGAAVEAAYKASVRRITTRATMTAMV 284

Query: 256 QMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRP--LKALTSVTSEFQRGMA 313
             +A   +  +L+  +   +  E+T GT      AM  +M    + AL  V  + Q+   
Sbjct: 285 ITLAFGGITLLLWTGARLVLAGEMTGGTLAQF--AMLAVMAAGSIGALGEVWGDVQKASG 342

Query: 314 ACQTLFGLMDLETE---RDNGKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQG 369
           A   +  L++ + +       K       GE+  ++V F Y G+ + PAL+     +  G
Sbjct: 343 AMDRISELLNAKPDIAAPPQPKTLPVPGQGEIAFENVVFAYPGRPDLPALNGFDLRVKPG 402

Query: 370 KTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLF 429
           +TVALVG SG+GKST+  L  RFYD  SG I LDG ++RD +   +R   ALV+Q+  LF
Sbjct: 403 ETVALVGPSGAGKSTVLRLLLRFYDPQSGCILLDGVNLRDAEPAEVRARMALVAQDSPLF 462

Query: 430 NDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRV 489
           + +  +NI +    + T EQ+  AA  A A  F+  +P+G DT +GE   +LSGGQRQR+
Sbjct: 463 SGSAMDNIRFGRP-DATDEQVRAAADAAQATGFLSALPEGFDTPVGERAKTLSGGQRQRL 521

Query: 490 AIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEIL 549
           AIARAL+R+AP+L+LDEATSALD ESE+ +Q AL    + +T LVIAHRL+T+ +AD I+
Sbjct: 522 AIARALVREAPILLLDEATSALDAESEQLVQQALATAMEGRTTLVIAHRLATVLKADRIV 581

Query: 550 VVDEGEIIERGRHADLLAQDGAYAQLHRIQFG 581
           V++EG ++E+G HA+L A+ G YA+L R+QFG
Sbjct: 582 VMEEGRVVEQGAHAELFAKGGLYARLARLQFG 613