Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., ABC transporter ATP-binding protein from Ralstonia sp. UNC404CL21Col

 Score =  310 bits (793), Expect = 2e-88
 Identities = 191/585 (32%), Positives = 316/585 (54%), Gaps = 12/585 (2%)

Query: 3   LHSDESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDE---GFGNA 59
           L    S W    RLW + R Y+  L+     L+I  AA      L  PL+D+    + N 
Sbjct: 162 LEQPPSTWALL-RLWRFARPYRWELLAGFALLLIGTAATLVPPYLTMPLMDKVLIPYQNG 220

Query: 60  ESNFLRILPFMILGLM---FVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFF 116
           +    R++   + GL     V  + G+A +Y L+ VS  +   +R   + H + + + +F
Sbjct: 221 QPVDYRLVTLYLSGLFGAALVAWVLGWARTYLLARVSERISADLRTTTYEHLLKLSLEYF 280

Query: 117 DQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAP 176
             + TG L++RI  +S++++   S  L+    +   I     ++      L+LV +V  P
Sbjct: 281 GGKRTGDLMARIGSESDRISVFLSLHLLDFATDVLMIAMTAVILVSIDPWLALVTLVPLP 340

Query: 177 VVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNS 236
            +A+ I  V  R R     +      +T+     + G +VV ++  ++ E  RF + +  
Sbjct: 341 FIAWMIHLVRDRLRHGFEKIDRIWSEITNVLADTIPGIRVVKAFAQEKREVTRFAEANKH 400

Query: 237 MRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMR 296
                 ++ +  S+  P + ++  + L  V            +T G      + +     
Sbjct: 401 NLAINDRVNAVWSLFTPTVTLLTEVGLLVVWIFGIWQVSHDAITVGVLVAFLTYISRFYT 460

Query: 297 PLKALTSVTSEFQRGMAACQTLFGLMD-LETERDNGK-YEAERVNGEVDVKDVTFTYQGK 354
            L +++ + S  Q+  A  + +F ++D + +  +  K    E+VNG ++++D+ F Y  +
Sbjct: 461 RLDSMSRIVSVTQKAAAGAKRIFDILDHVSSVPEPAKPVHIEKVNGAIELRDLGFRYGNR 520

Query: 355 EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTN 414
               +  ++ SI  G+ + LVG SGSGKST+ NL  RFYDV  G+I LDG D+R   ++ 
Sbjct: 521 A--VIRGLNLSIQPGEMIGLVGHSGSGKSTLVNLICRFYDVSEGAIRLDGTDIRSLPVSE 578

Query: 415 LRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVI 474
            RR+  LV Q   LF  TIA+NIAY  + + TRE+I  AAR AHA EFI  +P G D+++
Sbjct: 579 FRRNIGLVLQEPFLFFGTIADNIAYG-KPDATREEIIAAARAAHAHEFILRLPHGYDSLV 637

Query: 475 GENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLV 534
           GE G +LSGG+RQR++IARALL +  +LI+DEATS++DT +E+ IQ ALD L + +T + 
Sbjct: 638 GERGQALSGGERQRISIARALLINPRILIMDEATSSVDTTTEKEIQKALDNLVQGRTTIA 697

Query: 535 IAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQ 579
           IAHRLST+ +AD ++V+D G+I+E G H +LLA++GAY +L++ Q
Sbjct: 698 IAHRLSTLRKADRLVVMDRGQIVEVGNHDELLAREGAYYKLYQAQ 742