Pairwise Alignments

Query, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  289 bits (740), Expect = 2e-82
 Identities = 170/567 (29%), Positives = 299/567 (52%), Gaps = 4/567 (0%)

Query: 16  LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLM 75
           +W +++ Y+  +V + + L+I + A   +   ++ ++DEGF    +  L  +  ++L + 
Sbjct: 42  IWQFLKPYRLRVVAAIVFLLIGSLAWLSLGQGVRLMVDEGFIKDNAQRLNEIILLVLLIT 101

Query: 76  FVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQV 135
            V G + F   Y ++W+   V   +R  ++N  + +   F+ +  TG ++SR T DS  +
Sbjct: 102 AVSGTAVFCRFYLMTWLGERVSADIRLTVYNQLLKLSPAFYAKVRTGEVISRFTADSTLL 161

Query: 136 AGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRN 195
                 +L   +R G ++IG L +M   S +++L++++  P+V   + F  ++ R ++R 
Sbjct: 162 QTVVGSSLSMALRSGVTVIGGLAMMGITSVKMTLLVLLAVPLVLGPVGFFGRKVRTLARE 221

Query: 196 MQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVI 255
            Q  +  + +  ++ L     V +YG ++ +R  F+     +       +  +++    +
Sbjct: 222 SQDRVADLGAYVDETLHEIHTVQAYGHEDKDRSLFNGRVEDVMIAASGRIRYRAMLISSV 281

Query: 256 QMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAAC 315
             ++  A+ +V ++ + D +  ++T G  +        +   +  ++ V  E QR   A 
Sbjct: 282 MFLSIAAIASVTWVGAHDVMSGKMTGGELSAFMFYAVMVAGAVATISEVVGEIQRASGAA 341

Query: 316 QTLFGLMDLETERD---NGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTV 372
           + L  L + E +       K    +V GE+ ++ + F Y  + +  L  +  +I  G+ V
Sbjct: 342 ERLIELAETEVDIPAPLEPKTLPAKVRGELQLQQLNFHYPEQTQLVLRDLELTITAGERV 401

Query: 373 ALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDT 432
           ALVG SG+GKST+  L  RFY   SGSI LDG D+ +    +LR  FALV Q+  +F  +
Sbjct: 402 ALVGPSGAGKSTLFQLLQRFYVPSSGSIHLDGIDIAELSPKDLRAQFALVPQDSVIFATS 461

Query: 433 IANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIA 492
           +  N+ Y       +E I+ A   A A EFI    +G  T +GE G  LSGGQ+QR+AIA
Sbjct: 462 VLENVRYGRVDASEQEVID-ACIAARAHEFISEFSEGYQTYLGERGVRLSGGQKQRIAIA 520

Query: 493 RALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVD 552
           R +L D P+L+LDEATSALD  SE+ ++ ALDEL K KT L+IAHRL+T+  AD I+V D
Sbjct: 521 RVILADRPILLLDEATSALDALSEQKVKLALDELMKGKTTLIIAHRLATVINADRIIVFD 580

Query: 553 EGEIIERGRHADLLAQDGAYAQLHRIQ 579
           +G I+  G+H  L+  +  Y +   +Q
Sbjct: 581 KGRIVASGKHQTLIQTNALYREFASLQ 607