Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Synechococcus elongatus PCC 7942

 Score =  167 bits (423), Expect = 2e-46
 Identities = 101/249 (40%), Positives = 141/249 (56%), Gaps = 15/249 (6%)

Query: 6   VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGV 64
           VIPARY S RLPGK L  I G+PM+QWVYE  + +   D+V IAT+D RV +A  AFG  
Sbjct: 7   VIPARYASERLPGKVLLPIAGRPMLQWVYEATIASNVFDQVAIATEDPRVVEAAAAFGAE 66

Query: 65  VCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAP-M 123
             +TS +  SGT+R+AE  A +  P   ++ NVQGD+P + P +++ +     A   P M
Sbjct: 67  AILTSADLASGTDRVAE--ASLHFPDCKVIANVQGDQPFVTPGLLQALVSPYRAGELPEM 124

Query: 124 ATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ--PLLRH 181
            T+    +   +  +PN VKV+ D+ G ALYFSR+ IP+ R         +V   P+  H
Sbjct: 125 TTVGGPYDPAQDADDPNTVKVVCDQRGNALYFSRSAIPYPR--------TVVHDLPVYHH 176

Query: 182 IGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLE 241
            G+YA+R  F+  Y    P+ LE+ E LEQLRVL  G +I V V        V+T +DLE
Sbjct: 177 FGLYAFRRDFLAQYRQLPPTPLERCESLEQLRVLEQGYRIRV-VPCADKVIEVNTADDLE 235

Query: 242 VVRRIVAER 250
                 ++R
Sbjct: 236 RANAWASQR 244