Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 4e-57
 Identities = 111/244 (45%), Positives = 159/244 (65%), Gaps = 13/244 (5%)

Query: 1   MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQ 59
           M+ T++IPARY S+R PGKPLA I GKPMIQ VYE+A  A G + + +ATDDER++ AV+
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLNAIYVATDDERIKDAVE 60

Query: 60  AFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC 119
           +FGG V MT  +  SGT+R+ + + ++ +  D +V+N+QGD+PLI P  I Q+ +     
Sbjct: 61  SFGGKVVMTGADAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIVELFRRH 120

Query: 120 SA--PMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQP 177
                MATL  +I D+AE+ +P  VK++ D   YALYFSRA IP+ RD           P
Sbjct: 121 PGEFEMATLGYQISDKAELDDPKHVKMVFDNDMYALYFSRACIPFGRD-------VSEYP 173

Query: 178 LLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAV-ALEAPPAGVDT 236
           + +H+G+YAY   F++T+      +LE +E LEQLR L +G +I VA+ A ++P   VDT
Sbjct: 174 VYKHLGVYAYTRRFVHTFNSLPLGRLEDLEKLEQLRALEYGHRIKVAISAFDSPE--VDT 231

Query: 237 PEDL 240
           PED+
Sbjct: 232 PEDI 235