Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase KdsB from Phaeobacter inhibens DSM 17395

 Score =  134 bits (336), Expect = 2e-36
 Identities = 94/265 (35%), Positives = 139/265 (52%), Gaps = 23/265 (8%)

Query: 1   MSFTVVIPARYQSTRLPGKPLADIGG-----KPMIQWVYEQAMQA-GADRVIIATDDERV 54
           MS  +VIPARY STR PGKPL  + G     + +I+  +  AM   G DRV++ATDDER+
Sbjct: 1   MSVLIVIPARYASTRYPGKPLVALTGASGESQTLIERSWRAAMAVNGVDRVVVATDDERI 60

Query: 55  EQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVAD 114
             A   FG  V MTS +  +GTER AE +A +    D IVVN+QGD PL P   +  +  
Sbjct: 61  RGAATGFGAEVVMTSESCGNGTERCAEALATLEGGYD-IVVNLQGDAPLTPHWFVEDLIS 119

Query: 115 NLA-ACSAPMATLAVEIED--------EAEVFNPNAVKVITDKSGYALYFSRATIPWDRD 165
            L  A    +AT  +  +         + +         +  +   ALYFS+  +P+   
Sbjct: 120 GLRDAPDKGLATPVLRCDGATLNSLLADRKAGRVGGTTAVFGRDNNALYFSKEVVPFTST 179

Query: 166 NFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAV 225
            + +AD+    P+  H+G+YAYR   ++ Y  W    LE +E LEQLR L +G KI + V
Sbjct: 180 AY-EADQD--TPVFHHVGVYAYRPDALSAYPGWPVGPLETLEGLEQLRFLENGRKI-LCV 235

Query: 226 ALEAPPA---GVDTPEDLEVVRRIV 247
            +EA       ++ PED+ ++  ++
Sbjct: 236 EVEARGREFWELNNPEDVPLIEAMM 260