Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (501), Expect = 2e-55
 Identities = 112/246 (45%), Positives = 154/246 (62%), Gaps = 13/246 (5%)

Query: 1   MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQ 59
           M+ T++IPARY S+R PGKPLA I GKPMIQ VYE+A  A G   + +ATDD R+++AV+
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVE 60

Query: 60  AFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC 119
           AFGG V MT  N  SGT+R+ + + ++ +  D +V+N+QGD+PLI P  I Q+       
Sbjct: 61  AFGGKVVMTDANAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIITLFERH 120

Query: 120 SAP--MATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQP 177
                MATL  EI +E E+ +P  VK++ D    ALYFSRA IP+ RD           P
Sbjct: 121 PGEFGMATLGYEITEEHELNDPKHVKMVFDNQFNALYFSRARIPFGRDTDD-------YP 173

Query: 178 LLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAV-ALEAPPAGVDT 236
           + +H+G+YAY   F+ T+      +LE +E LEQLR L HG  I VA+ A ++P   VDT
Sbjct: 174 VYKHLGVYAYTREFVRTFNKLPLGRLEDLEKLEQLRALEHGHTIKVAISAFDSPE--VDT 231

Query: 237 PEDLEV 242
           PED+ +
Sbjct: 232 PEDIRI 237