Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  178 bits (452), Expect = 9e-50
 Identities = 109/260 (41%), Positives = 150/260 (57%), Gaps = 18/260 (6%)

Query: 6   VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQAFGGV 64
           +IPARY S+R PGKPLADI G PM   VY++A +     +V++ATDDER+ QA       
Sbjct: 10  IIPARYASSRFPGKPLADIAGMPMFWHVYQRAARCPELCKVVLATDDERIAQAAHRLDVP 69

Query: 65  VCMTSPNHQSGTERLAEVV----------AKMAIPADHIVVNVQGDEPLIPPAIIRQVAD 114
             MT P+H+SGT+R+ E             K  +P D +VVN+QGDEP + P ++ Q+  
Sbjct: 70  FVMTRPDHESGTDRVYEAACLLGRDLESSGKAGLPDDAVVVNIQGDEPALDPRMLSQLVA 129

Query: 115 NLAACS----APMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKA 170
              A        +ATLA+ I D AE  +P+ VKV+T  +G ALYFSRA IP+ RD   +A
Sbjct: 130 PFTAAKDGARVRVATLAMAI-DAAEAASPDRVKVVTAVNGDALYFSRAAIPFARDGGVQA 188

Query: 171 DKAIVQP-LLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEA 229
             A   P  L H+G+YA+R   +  +    PS LE+ E LEQLR+L +G  I V V    
Sbjct: 189 GDAAAGPAYLGHVGLYAFRLEALRAFTQLAPSSLERREKLEQLRLLENGIPIRV-VPTTY 247

Query: 230 PPAGVDTPEDLEVVRRIVAE 249
              GVD PED+ ++  ++ E
Sbjct: 248 RTHGVDRPEDIGIIINLLGE 267