Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  132 bits (332), Expect = 7e-36
 Identities = 88/254 (34%), Positives = 131/254 (51%), Gaps = 12/254 (4%)

Query: 1   MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWV-YEQAMQAGADRVIIATDDERVEQAVQ 59
           M+   +IPAR  S+R PGKP+ADI G PM+  V +  AM        +AT D+ +    +
Sbjct: 1   MNIVAIIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSPTLTATYVATCDQEIYDYAE 60

Query: 60  AFGGVVCMTSPNHQSGTERLAEVVAKMAIPAD---HIVVNVQGDEPLIPPAII-RQVADN 115
           + G    MT  +H   T R AE + K+         IVV VQGDEP++ P +I   +A  
Sbjct: 61  SAGLKAVMTGDHHVRCTTRTAEALLKIEAATGKRVDIVVMVQGDEPMVTPDMIDAAIAPM 120

Query: 116 LAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIV 175
           LA  +  +  L   +E   E  +PN VKV+ D +  ALYFSR  +P  +           
Sbjct: 121 LADPAINVTNLMARMETVEEFEDPNEVKVVVDLNSDALYFSREPVPSRKKGVTDV----- 175

Query: 176 QPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVD 235
            P+ + + I  +R  ++  + D Q + LE IE ++ +R+L HGEK+ + V  +     VD
Sbjct: 176 -PMQKQVCIIPFRRDYLLKFNDMQETPLEIIESVDMMRILEHGEKVRM-VPTDKRTLSVD 233

Query: 236 TPEDLEVVRRIVAE 249
           TPEDL  V  ++AE
Sbjct: 234 TPEDLARVVDMMAE 247